Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00833 ATGAACCTTAGTAAAGCCAAACTTCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAATATTCCTGAAATGCTTGCAAACAAATCTGCAACTAGGTGGATACACAAAGTAATGGAAGAAATGAAAACTGAAATAGCATGTATCCGTCTAGGAAATGTCCATGTTATCCCTGTTACTTGTCCCATCATTGCCCTTGAATTTATTAGAAAACATGATGCTGCTTTTGCTTCAAGACCAATATCAATGGCCACTGATATTATCAGCAAAGGTTTCTTGACAACAGCTGTTACACCCTATGGGGAACAATGGAAAAAAATGAAGAAAATATTTGTTAATGAATTGTTCTCCCCCCAAAAACATCAATGGCTCACAAACAAAAGGATTGAAGAAGCTGATAATCTCATGTTTTATGTCTACAACAAATGCGAAAATGTAAAGGATATTGGTCTTGTGAATGTTAAGGATGTTGCACGACATTATTGTTGTAATTTGATGAGGAAATTGGTTTTCAATATAAGGTACTTTGGAGAAGGTAGGAATGATGGAGGTCCTGGTGTTGAGGAAGTGGAATATGTAGATGCCATTTTCACATTGCTTAGGTATGTTTTTGCCTTTTGTGTTTCTGACTATATGCCTTTGTTGAGGGGACTTGACATTGATGGTCATGAGAGAAAGGTGAAGGATGCTATGAGTATTGTGAACAAGTATAATGATCCTATCATTGAAAGGAGAATTGAAAAATGGAAAGATGGATCAAAGACTAGTGCTGATGCAGAGGACTTGCTTGATATTCTAATCTCTCTCAAAGATGCAAACAACAAACCATTATTGACATCAGATGAAATCAAGGCTCAAGCTATAGAACTTGTGCTGGGAGGAGTAGATAATCCATCACATGCAGCTGAATTTGCAATATCAGAAATGATAAATCAACCAAATTTACTTCAACGAGCCACTGAAGAATTGGACAATGTCGTAGGAAAACACAGACTAGTCCAAGAATCAGATATCCCAAAACTCAATTATGTGAAAGCTTGTGCTAGAGAAGCTTTTCGTCTTCATCCAATTACAATTTTTAATCCTCCCCATGTTGCTATGGACAACATAATGGTTGGTAATTACATGATCCCAAAAGGTAGCCATGTACTTCTAAGTAAACAAGGACTTGGTCGAAATCCAAAAGTTTGGAATGAACCTTACAAGTTTAAACCAGAACGACATTTAAAATATGACGGATCTATGGTAGTTTTGGCGGAACCAGATTTAAAATTCATATCATTTAGTACTGGAAGGCGCGGTTGTCCTGGAATTGTGCTTGGAACTACAATGACTATAATGTTATTGGGTAGATTGCTCCATGGCTTCAATTGGAGTGGACCTCCTAATGTATCAACCATTGATCTTCTCAACTATTCTAATGGTGATAGATACCTTGGAGGGCCACTTGTGGCAATAGCAAAGCCAAGATTGGCAGTTGAATTGTATCATCACCCATAA 1497 0.3754 MNLSKAKLPPGPKPWPIVGNIPEMLANKSATRWIHKVMEEMKTEIACIRLGNVHVIPVTCPIIALEFIRKHDAAFASRPISMATDIISKGFLTTAVTPYGEQWKKMKKIFVNELFSPQKHQWLTNKRIEEADNLMFYVYNKCENVKDIGLVNVKDVARHYCCNLMRKLVFNIRYFGEGRNDGGPGVEEVEYVDAIFTLLRYVFAFCVSDYMPLLRGLDIDGHERKVKDAMSIVNKYNDPIIERRIEKWKDGSKTSADAEDLLDILISLKDANNKPLLTSDEIKAQAIELVLGGVDNPSHAAEFAISEMINQPNLLQRATEELDNVVGKHRLVQESDIPKLNYVKACAREAFRLHPITIFNPPHVAMDNIMVGNYMIPKGSHVLLSKQGLGRNPKVWNEPYKFKPERHLKYDGSMVVLAEPDLKFISFSTGRRGCPGIVLGTTMTIMLLGRLLHGFNWSGPPNVSTIDLLNYSNGDRYLGGPLVAIAKPRLAVELYHHP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00833 498 FunFam Cytochrome P450 9 1 493 - -
Trre5g00833 498 SUPERFAMILY Cytochrome P450 7 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00833 498 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00833 498 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00833 498 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00833 498 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00833 498 PRINTS E-class P450 group I signature 160 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00833 498 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00833 498 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00833 498 PRINTS E-class P450 group I signature 63 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00833 498 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 4 495 - -
Trre5g00833 498 Pfam Cytochrome P450 9 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00833 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Trre5g00833 498 Gene3D Cytochrome P450 2 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00833 Trre-Chr5 5696294 5699202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00833 2 495 Cytochrome P450 AT4G39950 53.131 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00833 - K14984 gmx:100787378 724.931