Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00832 ATGAGTTACACTCCTACTTTCCTCTTGCTACTCCCTCTGTCCTTGTGGCCTCTATTCCTTATGATGTTTTTTCTTATGGTTTTGATTTCCAAAAAGTTTATGGTAATTAAAACCATAAGACACTTTTTAATTATGAACCTTAGTAAAGCCAAACTTCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAATATTCCTGAAATGCTTGCAAACAAATCTGCAACTAGGTGGATACACAAAGTAATGGAAGAAATGAAAACTGAAATAGCATGTATCCGTCTAGGAAATGTCCATGTTATCCCTGTTACTTGTCCCATCATTGCCCTTGAATTTATTAGAAAACATGATGCTGCTTTTGCTTCAAGACCAATATCAATGGCCACTGATATTATCAGCAAAGGTTTCTTGACAACAGCTGTTACACCCTATGGGGAACAATGGAAAAAAATGAAGAAAATATTTGTTAATGAATTGTTCTCCCCCCAAAAACATCAATGGCTCACAAACAAAAGGATTGAAGAAGCTGATAATCTCATGTTTTATGTCTACAACAAATGCGAAAATGTAAAGGATATTGGTCTTGTGAATGTTAAGGATGTTGCACGACATTATTGTTGTAATTTGATGAGGAAATTGGTTTTCAATATAAGGTACTTTGGAGAAGGTAGGAATGATGGAGGTCCTGGTGTTGAGGAAGTGGAATATGTAGATGCCATTTTCACATTGCTTAGGTATGTTTTTGCCTTTTGTGTTTCTGACTATATGCCTTTGTTGAGGGGACTTGACATTGATGGTCATGAGAGAAAGGTGAAGGATGCTATGAGTATTGTGAACAAGTATAATGATCCTATCATTGAAAGGAGAATTGAAAAATGGAAAGATGGATCAAAGACTAGTGCTGATGCAGAGGACTTGCTTGATATTCTAATCTCTCTCAAAGATGCAAACAACAAACCATTATTGACATCAGATGAAATCAAGGCTCAAGCTATAGAACTTGTGCTGGGAGGAGTAGATAATCCATCACATGCAGCTGAATTTGCAATATCAGAAATGATAAATCAACCAAATTTACTTCAACGAGCCACTGAAGAATTGGACAATGTCGTAGGAAAACACAGACTAGTCCAAGAATCAGATATCCCAAAACTCAATTATGTGAAAGCTTGTGCTAGAGAAGCTTTTCGTCTTCATCCAATTACAATTTTTAATCCTCCCCATGTTGCTATGGACAACATAATGGTTGGTAATTACATGATCCCAAAAGGTAGCCATGTACTTCTAAGTAAACAAGGACTTGGTCGAAATCCAAAAGTTTGGAATGAACCTTACAAGTTTAAACCAGAACGACATTTAAAATATGACGGATCTATGGTAGTTTTGGCGGAACCAGATTTAAAATTCATATCATTTAGTACTGGAAGGCGCGGTTGTCCTGGAATTGTGCTTGGAACTACAATGACTATAATGTTATTGGGTAGATTGCTCCATGGCTTCAATTGGAGTGGACCTCCTAATGTATCAACCATTGATCTTCTCAACTATTCTAATGGTGATAGATACCTTGGAGGGCCACTTGTGGCAATAGCAAAGCCAAGATTGGCAGTTGAATTGTATCATCACCCATAA 1629 0.372 MSYTPTFLLLLPLSLWPLFLMMFFLMVLISKKFMVIKTIRHFLIMNLSKAKLPPGPKPWPIVGNIPEMLANKSATRWIHKVMEEMKTEIACIRLGNVHVIPVTCPIIALEFIRKHDAAFASRPISMATDIISKGFLTTAVTPYGEQWKKMKKIFVNELFSPQKHQWLTNKRIEEADNLMFYVYNKCENVKDIGLVNVKDVARHYCCNLMRKLVFNIRYFGEGRNDGGPGVEEVEYVDAIFTLLRYVFAFCVSDYMPLLRGLDIDGHERKVKDAMSIVNKYNDPIIERRIEKWKDGSKTSADAEDLLDILISLKDANNKPLLTSDEIKAQAIELVLGGVDNPSHAAEFAISEMINQPNLLQRATEELDNVVGKHRLVQESDIPKLNYVKACAREAFRLHPITIFNPPHVAMDNIMVGNYMIPKGSHVLLSKQGLGRNPKVWNEPYKFKPERHLKYDGSMVVLAEPDLKFISFSTGRRGCPGIVLGTTMTIMLLGRLLHGFNWSGPPNVSTIDLLNYSNGDRYLGGPLVAIAKPRLAVELYHHP 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00832 542 SUPERFAMILY Cytochrome P450 51 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 Pfam Cytochrome P450 53 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 23 539 - -
Trre5g00832 542 Gene3D Cytochrome P450 42 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00832 542 FunFam Cytochrome P450 9 45 537 - -
Trre5g00832 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00832 Trre-Chr5 5696162 5699202 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00832 4 539 Cytochrome P450 AT4G39950 51.024 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00832 - K14984 gmx:100787378 731.865