Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00831 ATGAGTATTGTGAACAAGTATAATGATCCTATCATTGAAAGGAGAATTGAAAAATGGAAAGATGGATCAAAGACTAGTGCTGATGCAGAGGACTTGCTTGATATTCTAATCTCTCTCAAAGATGCCAACAACAAACCATTATTGACATCAGATGAAATCAAGGCTCAAGCTATAGAACTTGTGCTGGGAGGAGTAGATAATGTTAGAAATTTACTTCAACGAGCCACTGAAGAATTGGACAATGTCGTAGGAAAACACAGACTAGTCCAAGAATCAGATATCCCAAAACTCAATTATGTGAAAGCTTGTGCTAGAGAAGCTTTTCGTCTTCATCCAATTACAATTTTTAATCCTCCCCATGTTGCTATGGCCAACATAAAGGTTGCAAAGCCAAGATTGGCAGTCGAATTGTATCATCCATAA 423 0.3735 MSIVNKYNDPIIERRIEKWKDGSKTSADAEDLLDILISLKDANNKPLLTSDEIKAQAIELVLGGVDNVRNLLQRATEELDNVVGKHRLVQESDIPKLNYVKACAREAFRLHPITIFNPPHVAMANIKVAKPRLAVELYHP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00831 140 Coils Coil 65 85 - -
Trre5g00831 140 Pfam Cytochrome P450 72 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00831 140 Gene3D Cytochrome P450 1 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00831 140 SUPERFAMILY Cytochrome P450 3 128 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00831 140 PANTHER CYTOCHROME P450 98A9 11 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00831 Trre-Chr5 5669207 5675769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00831 2 129 Cytochrome P450 AT4G39950 53.521 9.74e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00831 - K12153 vra:106779949 168.703