Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00830 ATGGTAATCAAAACCATAAGATACAAGAAACTTAACAAACCTAAACTTCCCCCAGGTCCCAAACCCTGGCCAATAGTTGGTAATCTTCCTGAAATGCTTGCAAACAAACCTACAACTAGGTGGATACATAAAATGATGGAAGAACTGAACACCGAAATAGCATGCATCCGTCTAGGAAATGTCCATGTTATCCCTGTTACTTGTCCCACCATTGCCTATGAATTCTTCAGAAAACATGACGCCGATTTTGCATCAAGGCCACTAAGCATGGCCAGTGATATTATCTCCAATGGCTACTTGTCATCAGTTCTTGTACCCTATGGAGAACAATGGAAAAAGATGAAGAAAATCATTGTTAACGATTTGTTATCTCCATTTAGACATCAATGTCTTCAAGATAAAAGGAACGAAGAAGCCGATAATCTTATGTTTTATGTGTACAACAAATGCAACAATGGTGGCCTTGTGAATATTAGAATTGCTACACAACATTATTGTGGTAATGTGTTTAGGAAATTGTTTTTTAATACAAGGTACTTTGGAAAGGGTATGAAGGATGGAGGGCCCGGTATTGAAGAAATTGAACATGTTGATGCTGCTTTTATATTGCTTAATTATGCTTTTGCTTTCTCTCCATCTGATTATATCCCATGGTTGAGGCTACTTGACTTGGATGGCCATAAGGGCAAGGTAAAAAATGCAATGAGGATAATGAACAAGTATCATGATCCCATCATTGATGAGAGAATCAAACAATGGAATGATGGATCAAAAAAAGTTGAAGAGGATTTGCTAGATGTTTTGATCTCCCTCAAGGATGTCAATAATATTCCGTTATTGTCAACTAAAGAAATCAAGGCACAAATTATTGAATTGATGAATGCAATGGTAGATAATCCATCGAACGCCGTTGAATGGATATTGATTGAAATGTTAAATCAACCTGAACTATTTCAAAAGGCCACAGAAGAGTTGGACAATATAGTTGGAAAAAATAGGTTGGTCCAAGAATCGGATATTCCTAAGCTCAACTTCTTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCCATAACAACATTCAATGTTCCCCACGTCTCTATGAATGATACAATTGTTGGAAATTATTTGATACCAAAGGGTAGCCATATATTGCTTGGAAGAAGTGGTCTTGGGACAAACCCAAAAGTTTGGAGTGAACCTTACAAATTCAAACCAGAACGTCATCTCAAGAATGATGGGTCTAATATAACTTTGACAGAACCACATTTAAGGTTCATATCTTTTAGTACCGGAAGGCGTGGTTGCCCTGGTGTCATGCTTGGAACTACAATGACTATTTTATTATTAGCTAGGATTCTCCATGGGTTCACTTGGAGTGCACCTCCCAATATATCAAGAATCAATGTTGTTGAGTCCAAAGGTATTATGTCTTTTGCTGAGCCACTTATAATTGTAGCAAAGCCACGATTAACAGCAAAATTGTACAACTTTCAATGGAAGTGA 1509 0.3744 MVIKTIRYKKLNKPKLPPGPKPWPIVGNLPEMLANKPTTRWIHKMMEELNTEIACIRLGNVHVIPVTCPTIAYEFFRKHDADFASRPLSMASDIISNGYLSSVLVPYGEQWKKMKKIIVNDLLSPFRHQCLQDKRNEEADNLMFYVYNKCNNGGLVNIRIATQHYCGNVFRKLFFNTRYFGKGMKDGGPGIEEIEHVDAAFILLNYAFAFSPSDYIPWLRLLDLDGHKGKVKNAMRIMNKYHDPIIDERIKQWNDGSKKVEEDLLDVLISLKDVNNIPLLSTKEIKAQIIELMNAMVDNPSNAVEWILIEMLNQPELFQKATEELDNIVGKNRLVQESDIPKLNFLKACAREAFRLHPITTFNVPHVSMNDTIVGNYLIPKGSHILLGRSGLGTNPKVWSEPYKFKPERHLKNDGSNITLTEPHLRFISFSTGRRGCPGVMLGTTMTILLLARILHGFTWSAPPNISRINVVESKGIMSFAEPLIIVAKPRLTAKLYNFQWK 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00830 502 SUPERFAMILY Cytochrome P450 17 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00830 502 CDD CYP79 51 492 - -
Trre5g00830 502 Gene3D Cytochrome P450 9 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00830 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Trre5g00830 502 FunFam Cytochrome P450 9 9 495 - -
Trre5g00830 502 Pfam Cytochrome P450 17 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00830 502 PANTHER CYTOCHROME P450 98A9 6 498 - -
Trre5g00830 502 PRINTS E-class P450 group I signature 71 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00830 502 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00830 502 PRINTS E-class P450 group I signature 165 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00830 502 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00830 502 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00830 502 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00830 502 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00830 Trre-Chr5 5664952 5667489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00830 13 497 Cytochrome P450 AT4G39950 55.556 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00830 - K14984 gmx:100787378 721.85