Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00817 ATGGCCACATTATTTCTCACAATTCAATCCCATTCCCATTCCCATTCACATGCAAAACTAACTCCTGATTTTTACAACGATGTTTGCCCTCAGGCATTGCCAATTATTAAGTCAATTGTTAGCCAAAAAATTAACTTTAAACCACGCATGGGAGCACATTTACTCCGCTTGCATTTCCATGACTGTTTTGTCAATGGGTGTGATGGATCAATTTTGCTGGATGACACCCCTAACTTCATAGGTGAAAAGAGTGCCTCAGGAAATGTTGATTCAGTTAAAGGCTATATGCTTGTTGATATAATTAAAGCAGAACTTGACAAAGCTTGCAAAGGCCCTGTGGTATCATGTGCAGATATCTTAGCCGTAGCCGCTCGTGATTCTGTCTCCATTTTGGGAGGTCCAAGCTATTGGTATGAAGTTCTACTAGGAAGAAGAGATGCTAGAAGTACTACAAAAGAAGCTGCTGAATTAAATCTTCCTTCACAACTTTTCAATTTTTCCCAACTTATTTCTAATTTTAAGTCTCAAGGCCTAAACCTTAAAGATCTTGTAACACTATCTGGTGCTCACACAATTGGAATGGCTAGGTGCTCTACTTTTAAGGATAGAATCTACAATGACACTAACATAGATCAAAATTTTGCAATTTCTTTACAAGAAAATTGTCCTATAAAAGGTGGTGATGACAATATGGAACCATTGGATTATGTCACTCCTCATAAATTTGATAATTCATATTACAAAAATTTGGTTAGTAAAAAAGGTCTATTCCATTCTGATCAAGAGCTCTTTAATGGTATTGATTGTGAAAGTGACATGTTGGTGGAACTTTATAGTAGAGACTCAGATGTTTTTGCAAGAAATTTTAAAACTTCCATGATTAAGATGGGTAATATAAAGCCTCTTACCGGAATTTTTGGAGAGATCAGAACCGATTGTAGCAAAGTTAACTAG 954 0.3616 MATLFLTIQSHSHSHSHAKLTPDFYNDVCPQALPIIKSIVSQKINFKPRMGAHLLRLHFHDCFVNGCDGSILLDDTPNFIGEKSASGNVDSVKGYMLVDIIKAELDKACKGPVVSCADILAVAARDSVSILGGPSYWYEVLLGRRDARSTTKEAAELNLPSQLFNFSQLISNFKSQGLNLKDLVTLSGAHTIGMARCSTFKDRIYNDTNIDQNFAISLQENCPIKGGDDNMEPLDYVTPHKFDNSYYKNLVSKKGLFHSDQELFNGIDCESDMLVELYSRDSDVFARNFKTSMIKMGNIKPLTGIFGEIRTDCSKVN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00817 317 FunFam Peroxidase 160 296 - -
Trre5g00817 317 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 Gene3D - 23 314 - -
Trre5g00817 317 Gene3D Peroxidase, domain 2 160 296 - -
Trre5g00817 317 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Trre5g00817 317 CDD secretory_peroxidase 19 316 IPR033905 GO:0004601|GO:0042744
Trre5g00817 317 PANTHER PEROXIDASE 72-RELATED 18 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 Pfam Peroxidase 38 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 ProSiteProfiles Plant heme peroxidase family profile. 19 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g00817 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Trre5g00817 317 SUPERFAMILY Heme-dependent peroxidases 20 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00817 Trre-Chr5 5577548 5579683 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00817 17 317 Peroxidase AT5G05340 52.145 1.63e-112 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00817 K00430 - gmx:100816580 424.091