Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00814 ATGGCAGATGAAGCACAAATTGATGTGAAGGAGGAGGTTCCTGATATTGCACCATTTGATCCTACTAAAAAGAAGAAGAAAAAGAAACCCACAGTCGTAGATCTTGATGATGATTCAGTAGACAAGTTGGCTGAAAAGACAGAAAATCTGTCGGTTTCTGAGGGGTTTGACAGTACATTAGCTGGTGCAAAAAAGAAGAAGAAGAAACAGGTTGATAACTTAATTGATGAGAGTGCTGATGCGAAAAATGAAGATTTGGATGATCTCGCTGAAGAAGATGACCAAGATGCTGTTTCGTTGCAACCTCGTTACCCTTGGGAAGGGAGTGATCGTGATTATCAATACGAGGAGCTTTTGGGTAGGGTGTTTAACATTCTACGTGAGAATAATCCAGAACTTGCTGGAGACCGGCGGAGGACTGTTATGAGGCCTCCTCAAGTGCTCCGTGAGGGTACAAAGAAGACTGTTTTTGTGAATTTTATGGACCTTTGCAAAACGATGCACCGGCAGCCAGATCATGTCATGGCTTTCTTGCTTGCTGAATTGGGTACAAGTGGTTCTCTAGATGGACAGCAAAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAATTTCGAAGGAATTTTGCGTCGATATGTCAATGAATATGTCATTTGCCTTGGATGCAAAAGTCCCGACACAATACTTTCTAAGGAGAACCGTTTGTTCTTTCTCCGCTGTGAAAAGTGTGGATCGGGAAGATCAGTTGCACCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGACTGCAGGAGGGACATGA 807 0.4349 MADEAQIDVKEEVPDIAPFDPTKKKKKKKPTVVDLDDDSVDKLAEKTENLSVSEGFDSTLAGAKKKKKKQVDNLIDESADAKNEDLDDLAEEDDQDAVSLQPRYPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRTAGGT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00814 268 Gene3D - 110 252 - -
Trre5g00814 268 SMART eIF2Bneu4 137 246 IPR002735 GO:0003743|GO:0006413
Trre5g00814 268 FunFam Eukaryotic translation initiation factor 2 subunit 110 252 - -
Trre5g00814 268 MobiDBLite consensus disorder prediction 81 95 - -
Trre5g00814 268 MobiDBLite consensus disorder prediction 1 48 - -
Trre5g00814 268 Pfam Domain found in IF2B/IF5 136 245 IPR002735 GO:0003743|GO:0006413
Trre5g00814 268 MobiDBLite consensus disorder prediction 1 105 - -
Trre5g00814 268 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 112 219 IPR016189 GO:0003743|GO:0006413
Trre5g00814 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 116 265 IPR045196 GO:0003743|GO:0006413
Trre5g00814 268 MobiDBLite consensus disorder prediction 60 80 - -
Trre5g00814 268 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 216 251 IPR016190 GO:0003743|GO:0006413
Trre5g00814 268 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00814 Trre-Chr5 5568893 5571699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00814 1 263 Eukaryotic Initiation Factors Gene Family AT5G20920 72.761 1.95e-129 366