Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00789 ATGAAGCTCCAATTTGATTCACATGAGTTTATCACATCCGTTGTGTTTATTGGTTTTGTAGCACTGTTGTTTCGTTTGTACGCTAGTTTTGTACATAAGCCAAATGTTCTTCGTTCTAAGCTAAAGAAACAAGGTATAAATGGTCCACCTCCAACTATATTGCTTGGAAATCTAATGGAGATAATGAAATCTCAGCTTACCACTCCAAATTCTCATTCTTTTCTCACTCACAACACTGCTTCTCTTGTCTTTCCCAAATTTGAAGAATGGAGGAAACAATATGGTGAAGTGTTCATGTTTTCTTTGGGAAACATTGAATCATTGAAACTACTAGGGCCTTTGTTGGGTGATGGTATTTTAACATCAAATGGGACTACATGGGCTCATCAAAGAAAGACATTGGCTCCAGAATTATACAACGATAAAGTTAAGGGAATGGTGAATATTATTAGTGAGTCTTGTGAATCTCTGCTAAGCTTATGGAATAGTAAAATAGAGGCTCAAAGTGGAGGAGTTACTGATATAAATATTGATGAGGACTTGAAAATATTCTCTGGTAATGTTATTTCAAGAACATGCTTTGGAAGTGATTATTCCAAGGGTGAAGAAATATTCTTCAAACTTGGAGCTCTCCAAGAAGTTGTTTTTTCCTGGAAAAATCTCTCTTCAGCAGTACCTGGCATGAGATACCTTCCAACAAAGACCAATAGAAAATCATGGATATTAGCAAAGGAAGTGAAAAGTTTGATACTTGAAGTGGTGAAGGAAAGAAAGGAGAAAACTTGTTTTGAAATGGACTTCCTGCAAATGGTTATTGAAGGTTCAAAGAAAAGTAATTTCACACAAGAGGCAAGTGACAATTTTATTATTGATAACTGCAAGAATATATCGTTAGCTGCCGAATCAACTGCAGTTGTTTCTTCGTGGTGTCTTATGTTATTGGCCACAAACCAAAATTGGCAAGATCGCGCTCGTGCTGAGGTTCTAGAAATTTGTAGAGGTAGAATCCCAGATTATGATATGCTTTCAAGGATGAAACAGCTTACGATGATTATTCATGAAACTTTGCGCCTTTATCCACCAGCACCTTTATTGGCTAGGCATACTTTCAAGGACATGAAATTTGGGAATATTGATGTCCCAAAGGGCACTGGCCTTTGGATATTGATTCTAACTATGCATACAAATCCTGATATATGGGGAGATGATGCATACAAATTCAATCCAGAAAGATTTGCTAATGGAGTTGCAGGTGCTTATATATACATTCACCTGCACATGGGATTACAATGA 1293 0.3674 MKLQFDSHEFITSVVFIGFVALLFRLYASFVHKPNVLRSKLKKQGINGPPPTILLGNLMEIMKSQLTTPNSHSFLTHNTASLVFPKFEEWRKQYGEVFMFSLGNIESLKLLGPLLGDGILTSNGTTWAHQRKTLAPELYNDKVKGMVNIISESCESLLSLWNSKIEAQSGGVTDINIDEDLKIFSGNVISRTCFGSDYSKGEEIFFKLGALQEVVFSWKNLSSAVPGMRYLPTKTNRKSWILAKEVKSLILEVVKERKEKTCFEMDFLQMVIEGSKKSNFTQEASDNFIIDNCKNISLAAESTAVVSSWCLMLLATNQNWQDRARAEVLEICRGRIPDYDMLSRMKQLTMIIHETLRLYPPAPLLARHTFKDMKFGNIDVPKGTGLWILILTMHTNPDIWGDDAYKFNPERFANGVAGAYIYIHLHMGLQ 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00789 430 SUPERFAMILY Cytochrome P450 48 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00789 430 Pfam Cytochrome P450 113 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00789 430 Gene3D Cytochrome P450 34 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00789 430 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00789 430 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00789 430 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00789 430 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00789 430 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00789 430 PANTHER CYTOCHROME P450 FAMILY MEMBER 34 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00789 Trre-Chr5 5360500 5363090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00789 92 422 Cytochrome P450 AT5G24900 40.580 1.61e-84 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00789 K24544 - gmx:100785420 565.074