Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00719 ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCACCCTACCGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTAGGATTGAGTTGGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGCTACCGGGAAAAGATTTGGAATGGTATTTTTTCAGCCCACGGGACAGGAAGTACCCAAATGGGTCAAGAACCAATAGAGCAACAAAATCTGGATATTGGAAGGCAACGGGGAAAGATCGTAAGGTGAATTCTCAAACTCGAGCAGTTGGTATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCACCACATGGATCTCGTACCGGTTGGGTTATGCATGAGTACCGTCTTGATGAAAGAGAATGTGACAATCCTTCTTCAGGCTTGCAGGATGCGTATGCTCTTTGCCGTATATTCAAGAAGAGTACAGTGATAGCCCCAAAAGTTGGGGAGCAATATGTTAATAATGTGACAAGGCATGCAAATCATATTACAAGTGATCAACAATCATCAAGCATTGAGTTATACTCTGAAGGGGGAAGAGATGAAGTTTTAGAGAGCTCAAATTATTTGATGCCTTGGGATGCAAACTCAACCCAAAACATAAATGGGAATAATACTTTCAATAACAATGGTGGAATGGCAAGGGACAATGGAATTTGGACACAATTCTTATCAGAAGACTTGCTCAATCTTCCAACATCTTCTTCATCATTTCCCAGTTATGGATCCACACCTAATTACCCTCCATCCAAGGTGGATATAGCACTAGAATGTGCAAGAATGCAACATAGGTTTTCCATGCCACCCTTGGAGGTGGAAGACTTTCCACAAGTTGGTTTTAATTCTGAGCTGAAAATGACACAATTAGCCTCAAGTTCCATGAGTGGAACTAGAAATGAAACAGATATCTTGCAGGAAATTCTATCTGTTGCTCAAGCTTCCCAAGAATTGATAAATCAATCAAACTATTCACATGCATTTGGTGGTAGTGAAAACTATGCAACTCATCATGAAAATGATTTTACTTTTATGGTTGGAAATAATAATTACAATGTGAATGATCATATGAACTCCATGAGATATGATGACAAAGCATGGGAAGATCCAAACATGAGATCAATAGAGATTGGAGATCTTGATGATGAATTCAAGGCTGATAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGCAATGATTTAGAGAAGAGTTTTATGGAAGAGCATCAAAAGGTTGTTCCAATTGAGGAAATTTCAAGCTTCCAAACAAATAGGAAAGAGAATGAGGTGCAAGAATCTGAGCAACAAAATATCAACAAAGAAATCAATGACACTGACATTGGTAATTTCTCAATGGAGTTTATCAATCACAATGATGACCCAAATGAGAATTTTATAGATGATGGTAACATTGATTATTCAAATTCTACAAGCTATGAAGTTGTTGAAGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGACAAGTAGCTGACACATTTTTTCACCAAATAACACCTTCACAAACAATCAAAGTTCAGCTCAATCCAATTATGGAAAACAAAAAATCTATAGAGAATGAAGAAACATTGGTTATACCAAAGAAACAAGGGTACTCTTTCTTAAGAAAGTTTAAGGCCAATTTGATGGATTACATGAAAAAGCCATCAAAGACAATAGCAAGTGCTATTGTGTTTATGTTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTTGAAGATATGAAACCAAAGTCAAAGTATGTGGAAAGACAATATTGCTATGGAGCTAATAGCATGAAGAAAATCATTTGGAAGGAGCAAGAAAAAATTTGGTTTGTTGGTATCAAAAGTGGCAAAGGTTTTGATGTGGTCTTGAAGAAGATAGGAATTTTCCTCACTATATCTTTGGCTCTTTGTACTATGTGGGCTAACCATATGATAGTTTGTGCTTGA 2025 0.3728 MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSSGLQDAYALCRIFKKSTVIAPKVGEQYVNNVTRHANHITSDQQSSSIELYSEGGRDEVLESSNYLMPWDANSTQNINGNNTFNNNGGMARDNGIWTQFLSEDLLNLPTSSSSFPSYGSTPNYPPSKVDIALECARMQHRFSMPPLEVEDFPQVGFNSELKMTQLASSSMSGTRNETDILQEILSVAQASQELINQSNYSHAFGGSENYATHHENDFTFMVGNNNYNVNDHMNSMRYDDKAWEDPNMRSIEIGDLDDEFKADRMVENLRWVGMSSNDLEKSFMEEHQKVVPIEEISSFQTNRKENEVQESEQQNINKEINDTDIGNFSMEFINHNDDPNENFIDDGNIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHQITPSQTIKVQLNPIMENKKSIENEETLVIPKKQGYSFLRKFKANLMDYMKKPSKTIASAIVFMFALFLVLCVYLKEQVEDMKPKSKYVERQYCYGANSMKKIIWKEQEKIWFVGIKSGKGFDVVLKKIGIFLTISLALCTMWANHMIVCA 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00719 674 Coils Coil 441 461 - -
Trre5g00719 674 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Trre5g00719 674 FunFam Nac domain-containing protein 86 15 160 - -
Trre5g00719 674 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Trre5g00719 674 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 305 - -
Trre5g00719 674 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Trre5g00719 674 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00719 Trre-Chr5 4926293 4930878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00719 1 665 NAC Transcription Factor Family AT1G65910 45.109 3.16e-166 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre5g00719 NAM 7.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00719 - - gsj:114381841 937.176