Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00620 ATGGTTACCATTAAAAGTTCTTACACTGTGATTCCAGAAGAACCAACACCACAAGGTCGTTTATGGCTCTCCGGCAAAGACCAAGTAGCAACTCAACATCACACACCCACCATTTACATTTACAAACCAAAACAGAACCAAGAAAACATCATAGAAACACTAAAGAAATCTCTAAGCAAAATTCTAGTACACTACTATCCTATAGCTGGTAGATTGTGTTACACGGAAGAAGGTGGTAGAATAGAAGTGAATCTCAATGCCAAAGGAGCCATTTTGCTTGAAGCTGAAACCACAAAAACAATTCATGATTATGGTGACTTTTCACCTTCCGATTCAACCAAAGAGCTTGTTCCAATAATCAATTACAATCAACCCTTTCAAGAAATGCCACTTCTTCTTGTACAACTCACAAGTTTCAAAAATAACCAAGGCTTTGCAATTGCTGTTTCTTTATCCCATTCTTTATCGGATGGCATTGGAGCTGTTCGGTTCATCAACTCATGGGCGAAAATAGCACGTGGCGAAACACTAGAGCCTAATGAATTACCATTTCTTGATAGAACAATCATCAAATTTTCACACACACCACCGAAAGTACCATGCTTTGAACACGTGGAATTAAAACCTCTTCCACTCGTTCTAGGAAGAAAAGACACAAGTGAAGAAAGAAAGAAGAAAACAATAGCAACACTATTGAAACTCTCACATGAACATGTTGAGAAATTGAAGAAAAAAGCCAATGATTATTCATCAATGATGAAAAAAGGTTCAAGGCCTTTTAGTAAATTTGAAGCAATTGGTGCACATATATGGAGATGTGCATCTAAGGCACGTGATCTTGAAGATAATCAAGAAAGTGTTGTTAGATTCCATGCTGATATTAGAAAAAGAATTATTCCAGCACTTCCTCAAAACTTTTTTGCTAATGCTATAGCATTAACAGCAACAAAAGTATATATTGGAGAAATCACATCAAAGCCTTTAGGCTATGCAGCAGAAAAGATAAGAGAAGCAACTGAGCTTGTTAAAGATGAGTTTATAAAGTCACAAATTGATGTTATTAGGAGTTTTGAAAATATGGATGATGCAAAGAAATTGTTTCGTGGTGATGAACGTGAAAATGCACCATATTTTGGGAATCCAAATATTCAAATAGCTAGTTGGATTGGAATGCCATTTTTTGAAGCTGATTTTGGATGGGGGAAACCTATTTACTTTGGATATGCTTGTGTGATTCCACATGATAGGGCTTTCATGTATCTTGGTCCTGATGGAGATGGATCTATTATTGTGTGTTTGCATTTTCAGATTGCACATTTGGAGCTTTTCAACAAGTTCTTCTATGAAGATATATGA 1356 0.3614 MVTIKSSYTVIPEEPTPQGRLWLSGKDQVATQHHTPTIYIYKPKQNQENIIETLKKSLSKILVHYYPIAGRLCYTEEGGRIEVNLNAKGAILLEAETTKTIHDYGDFSPSDSTKELVPIINYNQPFQEMPLLLVQLTSFKNNQGFAIAVSLSHSLSDGIGAVRFINSWAKIARGETLEPNELPFLDRTIIKFSHTPPKVPCFEHVELKPLPLVLGRKDTSEERKKKTIATLLKLSHEHVEKLKKKANDYSSMMKKGSRPFSKFEAIGAHIWRCASKARDLEDNQESVVRFHADIRKRIIPALPQNFFANAIALTATKVYIGEITSKPLGYAAEKIREATELVKDEFIKSQIDVIRSFENMDDAKKLFRGDERENAPYFGNPNIQIASWIGMPFFEADFGWGKPIYFGYACVIPHDRAFMYLGPDGDGSIIVCLHFQIAHLELFNKFFYEDI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00620 451 Pfam Transferase family 1 448 - -
Trre5g00620 451 Gene3D - 215 450 IPR023213 -
Trre5g00620 451 Gene3D - 1 209 IPR023213 -
Trre5g00620 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00620 Trre-Chr5 4068786 4070141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00620 2 449 Monolignol Biosynthesis Gene Families AT5G48930 34.590 8.74e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00620 K13065 - gmx:100778626 554.288