Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00619 ATGGTTACCATTAAAAGTTCTTACACTGTGATTCCAGAAGAACCAACACCACAAGGTCGTTTATGGCTCTCCGACAAAGACCAAGTAGCAACTCAACATCACACACCCACCATTTACATTTACAAACCAAAACAGAACCAAGAAAACATCATAGAAACACTAAAGAAATCTCTAAGCAAAATTCTAGTATACTACTATCCTATTGCTGGTAGATTGTGTTACACGGAAGAAGGTGGTAGAATAGAATTGAATCTCAATGCCAAAGGAGCCATTTTGCTTGAAGCTGAAACCACAAAAACAATTCATGATTATGGTGACTTTTCACCTTCTGATTCAACCAAAGAGCTTGTTCCAATAATCAATTACAATCAACCCTTTCAAGAAATTCCACTTCTTCTTGTACAACTCACAAGTTTCAAAAATAACCAAGGCTTTGCAATTGCTGTTGCTTTATCCCACTCTTTAACAGATGGAATTGGAGCTGGTGGATTCATCACCTCATGGGCGAAAATAGCGCACGGCGAATCACTAGAGTCTAATGAATTACCATTTCTTGATAGAACAATAATCAAATTTTCACACACACCATCGAAAGTACCATGCTTTGAGCACATGGAATTGAAGCCTCTTCCACTCATTCTAGGAAGAAAAGATAAAAGTGAAGAAAGAAAGAAGAAAACAAAAGCAACACTATTGAAACTCTCACATGAACATGTTGAGAAATTGAAGAAAAAAGCCAATGATTATTCATCAATGATGAAAAAAGGTTCAAGGCCTTTTAGTAAATTTGAAGCAATTGGTGCACATATATGGAGATGTGCATCTAAGGCACGTGATCTTGATGATAATCAAGAAAGTTTTGTTAGATTCCATGCTGATATTAGAAAAAGAATTATTCCAGTACTTCCTCAAAACTTTTTTGCTAATGCTATAGCATTAACAGCAGCAAAAATATATATTGGAGAAATCACATCAAAGCCTTTAGGCTATGCAGCAGAAAAGATAAGAGAAGTAACTGAGCTTGTTAAAGATGAGTTTATAAAGTCACAAATTGATGTTATTAGGAGTTTTGAAAATATGGATGATGCAAAGAAATTGTTTCTTGGTGGATGA 1113 0.3522 MVTIKSSYTVIPEEPTPQGRLWLSDKDQVATQHHTPTIYIYKPKQNQENIIETLKKSLSKILVYYYPIAGRLCYTEEGGRIELNLNAKGAILLEAETTKTIHDYGDFSPSDSTKELVPIINYNQPFQEIPLLLVQLTSFKNNQGFAIAVALSHSLTDGIGAGGFITSWAKIAHGESLESNELPFLDRTIIKFSHTPSKVPCFEHMELKPLPLILGRKDKSEERKKKTKATLLKLSHEHVEKLKKKANDYSSMMKKGSRPFSKFEAIGAHIWRCASKARDLDDNQESFVRFHADIRKRIIPVLPQNFFANAIALTAAKIYIGEITSKPLGYAAEKIREVTELVKDEFIKSQIDVIRSFENMDDAKKLFLGG 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00619 370 Gene3D - 1 209 IPR023213 -
Trre5g00619 370 Gene3D - 215 369 IPR023213 -
Trre5g00619 370 Pfam Transferase family 1 354 - -
Trre5g00619 370 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 356 - -
Trre5g00619 370 Coils Coil 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00619 Trre-Chr5 4059183 4060295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00619 2 354 Monolignol Biosynthesis Gene Families AT5G48930 32.394 1.05e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00619 K13065 - gmx:100778626 439.113