Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00618 ATGGTTACCATTAAAAGTTCTTACACTGTGATTCCAGAAGAACCAACACCACAAGGTCGTTTATGGCTCTCCGACAAAGACCAAGTAGCAACTCAACATCACACACCCACCATTTACATTTACAAACCAAAACAGAACCAAGAAAACATCATAGAAACACTAAAGAAATCTCTAAGCAAAATTCTAGTATACTACTATCCTATTGCTGGTAGATTGTGTTACACGGAAGAAGGTGGTAGAATAGAATTGAATCTCAATGCCAAAGGAGCCATTTTGCTTGAAGCTGAAACCACAAAAACAATTCATGATTATGGTGACTTTTCACCTTCTGATTCAACCAAAGAGCTTGTTCCAATAATCAATTACAATCAACCCTTTCAAGAAATTCCACTTCTTCTTGTACAACTCACAAGTTTCAAAAATAACCAAGGCTTTGCAATTGCTGTTGCTTTATCCCACTCTTTAACAGATGGAATTGGAGCTGGTGGATTCATCACCTCATGGGCGAAAATAGCGCACGGCGAATCACTAGAGTCTAATGAATTACCATTTCTTGATAGAACAATAATCAAATTTTCACACACACCATCGAAAGTACCATGCTTTGAGCACATGGAATTGAAGCCTCTTCCACTCATTCTAGGAAGAAAAGATAAAAGTGAAGAAAGAAAGAAGAAAACAAAAGCAACACTATTGAAACTCTCACATGAACATGTTGAGAAATTGAAGAAAAAAGCCAATGATTATTCATCAATGATGAAAAAAGGTTCAAGGCCTTTTAGTAAATTTGAAGCAATTGGTGCACATATATGGAGATGTGCATCTAAGGCACGTGATCTTGATGATAATCAAGAAAGTTTTGTTAGATTCCATGCTGATATTAGAAAAAGAATTATTCCAGTACTTCCTCAAAACTTTTTTGCTAATGCTATAGCATTAACAGCAGCAAAAATATATATTGGAGAAATCACATCAAAGCCTTTAGGCTATGCAGCAGAAAAGATAAGAGAAGTAACTGAGCTTGTTAAAGATGAGTTTATAAAGTCACAAATTGATGTTATTAGGAGTTTTGAAAATATGGATGATGCAAAGAAATTGTTTCTTGCTGATTTTGGATGGGGGAAACCTATTTACTTTGGATATGCTTGTGTGATTCCACATGATAGGGCTTTCATGTATCTTGGTCTTGATGGAGATGGATCTATTATTGTGTGTTTGCATTTTCAGATTGCACATTTGGAGCTTTTCAACAAGTTCTTCTATGAAGATATATGA 1275 0.3529 MVTIKSSYTVIPEEPTPQGRLWLSDKDQVATQHHTPTIYIYKPKQNQENIIETLKKSLSKILVYYYPIAGRLCYTEEGGRIELNLNAKGAILLEAETTKTIHDYGDFSPSDSTKELVPIINYNQPFQEIPLLLVQLTSFKNNQGFAIAVALSHSLTDGIGAGGFITSWAKIAHGESLESNELPFLDRTIIKFSHTPSKVPCFEHMELKPLPLILGRKDKSEERKKKTKATLLKLSHEHVEKLKKKANDYSSMMKKGSRPFSKFEAIGAHIWRCASKARDLDDNQESFVRFHADIRKRIIPVLPQNFFANAIALTAAKIYIGEITSKPLGYAAEKIREVTELVKDEFIKSQIDVIRSFENMDDAKKLFLADFGWGKPIYFGYACVIPHDRAFMYLGLDGDGSIIVCLHFQIAHLELFNKFFYEDI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00618 424 Gene3D - 1 209 IPR023213 -
Trre5g00618 424 Pfam Transferase family 1 421 - -
Trre5g00618 424 Coils Coil 217 237 - -
Trre5g00618 424 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 409 - -
Trre5g00618 424 Gene3D - 215 423 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00618 Trre-Chr5 4059183 4060539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00618 2 422 Monolignol Biosynthesis Gene Families AT5G48930 30.769 1.95e-76 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00618 K13065 - gmx:100778626 494.197