Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00617 ATGGTTACCATTAAAAGTTCTTACACTGTGATTCCAGAAGAACCAACACCACAAGGTCGTTTATGGCTCTCCGACAAAGACCAAGTAGCAACTCAACATCACACACCCACCATTTACATTTACAAACCAAAACAGAACCAAGAAAACATCATAGAAACACTAAAGAAATCTCTAAGCAAAATTCTAGTACACTACTATCCTATTGCTGGTAGATTGTGTTACACGGAAGAAGGTGGTAGAATAGAATTGAATCTCAATGCCAAAGGAGCCATTTTGCTTGAAGCTGAAACCACAAAAACAATTCATGATTATGGTGACTTTTCACCTTCCGATTCAACCAAAGAGCTTGTTCCAATAATCAATTACAATCAACCCTTTCAAGAAATTCCACTTCTTCTTGTGCAACTCACAAGTTTCAAAAACAACCAAGGCTTTGCAATTGGTGTTGCTATTTGCCATTCTTTATCAGATGGCATTGGATCTGTCCGATTCATCAACGCATGGGCGAAAATAGCTCGTGGTGAAACACTAGACACTAATGAATTACCCTTTCTTGATAGAACAATAATCAAATTTTCACACACACCATTGAAAGTACCATGTTTTGAGCACATGGAATTGAAGCCTCTTCCACTCATTCTAGGAAGAAAAGATACAAGTGAAGAAAGAAAGAAGAAAACAACAGCAACATTATTGAAACTGTCACACGATCATGTTGAGAAGTTGAAGAAAAAAGCCAATGATTATTTATCAATGATGAGAAAAGGTTCAAGGCCTTTTAGTAAATTTGAAGCAATTGGTGCACATATATGGAGATGTGCATCTAAGGCACGTGATCTTGATGATAATCAAGAAAGTGTTGTTAGATTCCATGCTGATATTAGAAAAAGAATGATTCCACCACTTCCTCAAAACTTTTTTGCTAATGCTTTGGCATTAACAGCAACAAAAGTATATATTGGAGAAATCACATCAAAGCCTTTAGGCTATACAGCAGAAAAGATAAGAGAAGCAACTGAGCTTGTTAATGATGAGTTTATAAAGTCACAAATTGATGTTATTAGAAGTTTTGAAAATATGGATGATGCAAGGGGATTGTTTTTAGGTGATGAAACTGAAAATGCACCATATTTTGGGAATCCAAATTTTCAATTAACTAGTTGGATGGGAATGCCATTTTTTGAAGCTGATTTTGGATGGGGGAAGCCTATTTACTTTGGATTTGCTTGTGTGTCTCCACATGACAGGGCATTCATATATCTTAGTCCTAATGGAGATGGATCTGTTATTGTCTCTTTGCATTTTCAGATTGCACATTTGGAGCTTTTCAACAAGTTATTCTAA 1344 0.3594 MVTIKSSYTVIPEEPTPQGRLWLSDKDQVATQHHTPTIYIYKPKQNQENIIETLKKSLSKILVHYYPIAGRLCYTEEGGRIELNLNAKGAILLEAETTKTIHDYGDFSPSDSTKELVPIINYNQPFQEIPLLLVQLTSFKNNQGFAIGVAICHSLSDGIGSVRFINAWAKIARGETLDTNELPFLDRTIIKFSHTPLKVPCFEHMELKPLPLILGRKDTSEERKKKTTATLLKLSHDHVEKLKKKANDYLSMMRKGSRPFSKFEAIGAHIWRCASKARDLDDNQESVVRFHADIRKRMIPPLPQNFFANALALTATKVYIGEITSKPLGYTAEKIREATELVNDEFIKSQIDVIRSFENMDDARGLFLGDETENAPYFGNPNFQLTSWMGMPFFEADFGWGKPIYFGFACVSPHDRAFIYLSPNGDGSVIVSLHFQIAHLELFNKLF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00617 447 Gene3D - 1 209 IPR023213 -
Trre5g00617 447 Gene3D - 215 447 IPR023213 -
Trre5g00617 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 435 - -
Trre5g00617 447 Pfam Transferase family 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00617 Trre-Chr5 4050945 4052288 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00617 2 447 Monolignol Biosynthesis Gene Families AT5G48930 34.298 6.21e-90 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00617 K13065 - gmx:100778626 557.755