Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00581 ATGGTGAAACTTGGCTTGCCAAAGTCAGCCCATTTTTGTGGTGACAAGTTGGGTAATCTCATATGGGGAGTAGCACAAAACTTTTTTCTATTTATTGCAATGGTGATTATGAGCAATGGTATACATTTTTTTCTAAAACCTTATTCTCAACCTCGAATCACTTCCGACATATTTGTAGGACTAATTTTTGGAAACATAGGATTTGCACGCAATCTATTTACGGAATTCAACAAGACATTTGGATTTATAATTGATTTTGGTATGATGGGTTACATGTTTGCATTAGGAGTAGAAATGGACCCATATATACTATTACAAAAACCACCAAGACATGTTAGAGTTGCTTATTCTGGAGTTGGCATAACATTCATGCTAGCAATTGTTTTAACCCCTCTTATAAGATTCTTCCCACAAATGGATAAACTATTAGAATACACTACCGCTCTCTCCATCCTTCTATCTAGCACGGATTCGCCTGCATTGACGCGATTATTAACACAGCTCAAAATCGGAAAGTCAGATATCGGGAAGCTTGTAATCGCATCCGCAATGCACTCAGATTTTGTGTGCTATTGTTTTCTTTCCATTTGTTACATACTTGCTCCACTCCCCGAAATTTGCGATGATTTGCACAAAAATTATCTTTCAAAAACGAGCAAAATGGGTTTGGCAGTTTTTGTAGAAGTTTTATTCACACTAATGGTTTCGCCGTTTTTTATGAGTTGGGTTGATGAAGAAAATCCAGATGGTAAACCTATGAAAGGTCCACATTTGATACTTTCAATTGCATTTGTGGTGTTAATGTGTGCCTCTTCTGCTTTCGTTGGTTTTACTCCAATTTTAAGTGCATTTTTGGTAGGTGTTTGTTTTCCTAGAGAAGCCGATTTTAGACACTTCGAAGCTAAAAAGTATCGTACATGGGCAGATATAGTGTTGCTTATGGTTATTTCAATAACTGGAAAAATCTCTGGAGCACTTGTTTCTGGGGCAGTACAAGGATTTCGTTGGCCTGAAGCTACTGCAATAGGATTGCTTCTTACTACAAAGGGACATTTGCATATTTACTTGGCTGTCAAAGTGATGAATTGTGTAGCAACAACTAAGTCCAATGGCATTGGGATGATAATTGCAATATTTTTTACAGTTATGTACACACCATCAGTTGTAGCACAAATCATAAAACGTGCAAAGAAACGGGTACCTACTCGTCACTTAGTGCTTCAATCGCTCGACCCATTGAGCGAACTAAGGATCCTCTTATGTGTTCATGGACCTCACAATGCTCCTGCTTCCGTAAATTTTGTGGAGATTTCAAAAGGAGCAGCTGATCCTGGTATTCTAGTATATGTCACTGACATGATTGAACTAACGAACGAAATATCGGCAACTTTAGAGACGGACGAAGGAATGCACACGGCAACTGTGAAAGACAGGGAAATAATGGAAATGAGAGAAAAAATAACAAACTCATTCCAGGCACATGTTTTAGATAGTGGTGAAGGTATTACATTAAAAAGAACCCTGGCACTGTCAACAATTAATAACATGCCACGAGACATTTGTATTTTAGCAGAGGACATGATGGTTGCCCTTGTCATATTACCATTCCATAGGGTTCAGCGTCAGGACGGAACATTGGATGGTGGTAATCAAGGGTTCAGATATGTCAACAGAAAGGTGCTTAGAAGTGCCCCTTGTTCTGTTGGAATTCTAGTAGATAGAGGCCTTGGATCATTTGAACGTTTATCAAGATCTCAAACAAAAATAAATTTGGCAGTCATATTCATTGGTGGGAAAGATGATAGAGAAGCACTTGCCTACGCTAGCCGTGTCTCGCGACATCCAGCAGTAAAGCTCACTGTAATAAGATTCCTAGTAGATACAAGTGCAGAATCCTCTAGATTAGCTGGATACAGAATCATCCTACCAGATCAAGAGAAAGAAATGCAGTTAGATGATGAATGTTTTGCAGAGTTCTATGAGAAGCATGTGATTGGGGGGAAAATTGCATACATGGAGAAACATCTTGCAAATGCTGCCGAGACATTCTCTATTCTCAAATCATTTGAAGGACAATATTCATTGGTTATTTTAGGAAGAGAAGGAGGGGTAAATTCTATTTTAACAAGGGGGATGAATGATTGGCAACAGTGTCCTGAACTTGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAAGGACTGTCTCAGTTTTGATCATACAACAGCACAGAATTAAAGGAGAAATAGATGGACTAGCTGAAGACTTTTCTATCATGTCATATAATAATAAGTATGGTTAG 2307 0.3858 MVKLGLPKSAHFCGDKLGNLIWGVAQNFFLFIAMVIMSNGIHFFLKPYSQPRITSDIFVGLIFGNIGFARNLFTEFNKTFGFIIDFGMMGYMFALGVEMDPYILLQKPPRHVRVAYSGVGITFMLAIVLTPLIRFFPQMDKLLEYTTALSILLSSTDSPALTRLLTQLKIGKSDIGKLVIASAMHSDFVCYCFLSICYILAPLPEICDDLHKNYLSKTSKMGLAVFVEVLFTLMVSPFFMSWVDEENPDGKPMKGPHLILSIAFVVLMCASSAFVGFTPILSAFLVGVCFPREADFRHFEAKKYRTWADIVLLMVISITGKISGALVSGAVQGFRWPEATAIGLLLTTKGHLHIYLAVKVMNCVATTKSNGIGMIIAIFFTVMYTPSVVAQIIKRAKKRVPTRHLVLQSLDPLSELRILLCVHGPHNAPASVNFVEISKGAADPGILVYVTDMIELTNEISATLETDEGMHTATVKDREIMEMREKITNSFQAHVLDSGEGITLKRTLALSTINNMPRDICILAEDMMVALVILPFHRVQRQDGTLDGGNQGFRYVNRKVLRSAPCSVGILVDRGLGSFERLSRSQTKINLAVIFIGGKDDREALAYASRVSRHPAVKLTVIRFLVDTSAESSRLAGYRIILPDQEKEMQLDDECFAEFYEKHVIGGKIAYMEKHLANAAETFSILKSFEGQYSLVILGREGGVNSILTRGMNDWQQCPELGPIGDVLSGPDFSRTVSVLIIQQHRIKGEIDGLAEDFSIMSYNNKYG 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00581 768 Gene3D - 25 306 IPR038770 -
Trre5g00581 768 PANTHER CATION/H + ANTIPORTER 32 746 - -
Trre5g00581 768 Pfam Sodium/hydrogen exchanger family 32 301 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00581 Trre-Chr5 3767317 3771026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00581 9 761 Antiporter Super Family AT3G52080 43.851 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00581 K26731 - gmx:100786469 1008.44