Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00579 ATGGATGCAATTTATTTAGGATGGTTTGGTCTAGTAATTGGGTTTGTGTTGTGGTGGTGGAATGAGTATTGGTATGTTGTTCCTCTCAAGTTTAAATGCTCAAAATCTGCTACAAAATTGCCACTTGGTCACATGGGATTTCCTATCATTGGAGAAATGATTAGTTTTCTTTGGTATTTCAAAATTGTTCGACGTCCAGATGATTTCATTAATGCTAAGAGACGCAAATATGGTGATGGAGATGGCATGTTTAGAACACACCTCTTTGGGGTACCATCAGTTATAGTATACAGTGCAAGTGTTCACAAATATGTGCTACATAATGAGGAAACATTCAAAGCAGAATGGCCGACTATTGAACTTATGGGCCGAACTTCAATGGTAGCTGTCCATGGAAAAGCCCATACACGAGTCCGTAGCTTTGTTACCAATGCTATCAATCGGCCCGATGCCCTAAACCGCATTGCTGCTCTCGTCCAACCTCGCATGGTCATAGCTCTTCGATCTTGGGCACAAATGGGTAAAATTAATGCCCGGTTTGAAACTCAAAAGTTGACATTTGATAACATTGGGAAATTATTCATGAGCATGGAGCCAGGCCCTTTACTACAATCTATAGATAAGTTCTATCAAGCCTTGCTTTTAGGAGTGAGAGCCTATCCAATTAACGTTCCTGGTTTTGCATATCACCGTGCTCTTCAGTGTAGAAGAAAGCTTGAGCACATCTTTTGGATGGAATTAGATAAGAGAAAGAATAAAAATAAGGTGGAAACAATTGATATAATGGATGGGCTAATACAAATTGAAGATGGTGAAGGTGACAAATTGAGTGACAAAGAAGTTGTAGACAATATTGTCTCTCTAGTGGCTGCTGGATATATCTCTACTTCCCTTGTCTCAATGTGGGCAATATACCTTCTTGACAAGTATCCAATTGTGTTAAAAAAGCTAAGGGAAGAGAACATGGCTTTGAAAAAAGAAAGACCAGAGGATTTTATAACACCTAAAGATGTTTCTTATTTAAAATACACAAGCAAGGTTGTTGAAGAAGTTATAAGAATGGCCAATGTTGCTGCTTGTGCTTTCAGAAAAGCTGACAATGAAGTAAATTATAAAGGTTATAAGATACCAAAGGGATGGAATGTAATTCTCATGCTTCGTTATCTTCATACAAATTCAGAGAACTTCAAAGATCCAATGTGTTTTAATCCTGATAGATGGGATGAGCCAGCAAAGCTTGGATCATACCAACCATTTGGTGGTGGACAAAGACTATGCCCCGGAAACACACTTGCAAGAATTCAACTTGCACTTCTGCTTCATCATTTGTCCATAGGATACAAGTGGGAGCTCATTAACCCTAACGCAGATATAGGTTATCTTTCGCATCCTGCCCCGATTGATGGGGTCGAGGTTAAGTTCAGCAAACTGTGA 1434 0.3919 MDAIYLGWFGLVIGFVLWWWNEYWYVVPLKFKCSKSATKLPLGHMGFPIIGEMISFLWYFKIVRRPDDFINAKRRKYGDGDGMFRTHLFGVPSVIVYSASVHKYVLHNEETFKAEWPTIELMGRTSMVAVHGKAHTRVRSFVTNAINRPDALNRIAALVQPRMVIALRSWAQMGKINARFETQKLTFDNIGKLFMSMEPGPLLQSIDKFYQALLLGVRAYPINVPGFAYHRALQCRRKLEHIFWMELDKRKNKNKVETIDIMDGLIQIEDGEGDKLSDKEVVDNIVSLVAAGYISTSLVSMWAIYLLDKYPIVLKKLREENMALKKERPEDFITPKDVSYLKYTSKVVEEVIRMANVAACAFRKADNEVNYKGYKIPKGWNVILMLRYLHTNSENFKDPMCFNPDRWDEPAKLGSYQPFGGGQRLCPGNTLARIQLALLLHHLSIGYKWELINPNADIGYLSHPAPIDGVEVKFSKL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00579 477 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 PANTHER CYTOCHROME P450 26 38 462 - -
Trre5g00579 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Trre5g00579 477 Pfam Cytochrome P450 56 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 SUPERFAMILY Cytochrome P450 36 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00579 477 Gene3D Cytochrome P450 30 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00579 Trre-Chr5 3750344 3754743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00579 40 475 Cytochrome P450 AT1G05160 35.650 4.06e-100 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00579 - - tpra:123916160 786.178