Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00578 ATGGATACAATTTATTTAGGATGGTTTGGTCTAGTAATTGGGTTTGTGTTGTGGTGGTGGAATGAGTGTTGGTATGTTGTTCCTCTTAAGTTAAAATGCTCAAAATCGGCTACAAAATTGCCACCAGGTCACTTGGGATTTCCTTTTATCGGAGAAATGATTATTTTTCTTTGGTATTTTAAAATTGTTCGACGTCCAGATGATTTCATTAATGCTAAGAGGCGCAAATATGGAGATGGAGAAGGCATGTTTAGAACACACCTCTTTGGGAAGCCATCTATCATAGTATACACTCCAGCTGTTAACAAATTTGTGCTATTTTCTGACACCAACTTCAAACTAGAATGGCCCAGTGTTGAACTTCTGGGCCAAACTTCAATAGCGGCCGTCCATGGGAAAGCCCATACACGAGTCCGCAATTGTATTACCAATGCCATCAATCGGCCCGATGCCCTAAGCCGCATTGCTGCTCTTGTCCAACCTCGCCAAGTCGCTGCACTTCGTTCTTGGGTAGAAATGGGTAAAATCAATACCAAGGTTGAAACCGAAAAGCTAACACTTGAGAACATTGGGAAGCTATTCTTGGGCAAGGACTCAGGCCCTTTTATAAATTCTTTGGATAAGCTCTATCAAGGTGTACTTCCAGGAGTGAGAGCCTATCCAATTAACATTCCTGGTTTTGCATACCACCATGCTCTTCAGTGTAGAAGAAAGCTTGAGGACATTTTTTGGATGGAGTTAGATAAGAGAAAGAATGAAAATAATGTGGAAACATTAATAGATCTAATGGATGGGTTGATACAAATTGAAGATAGTGAAGGTGGCAAATTAAGTGACAAAGAAGTTATAGACAACATTGTCTCTCTAGTGTTTGGTGGATATATCTCTACTTCTATTGTATCAATGTGGGCTATTTACCTTCTTGCCAAGCATCCAAATGTGCTACAAAAGCTAAGGGAAGAAAACATGGCTTTCAAAAAGGGAAGTCCAGAGGAATTTATTACAACTAAAGATGTTTCAAATTTAAAATACACAAACAAGGTTGTTGAAGAAGTGATAAGAATAACCAATGTTACACCTTTTGTTTTTAGAAAAGCTGTAAATGAAGTCGACTATAAAGGTTATAAGATACCAAAGGGATGGAATTTAATTCTCCTCCTTCGTTATATTCATACCAATCCAGAGAACTATAAAGATCCTATGTATTTCAATCCTGATAGATGGAATGAGCCAGCAAAGCCAGGAACATACCAAGTGTTTGGTGGTGGACAAAGACTTTGCCCTGGAAACATGCTTGCAAGAATTCAACTAGCACTTATGCTTCACCATTTGTCAATAGGATACAAGTGGGAGCTCATTAATCCGAACGCAAATATAATTTATCTTTCACATCCTGCTCCTATTGACGGGGTCGAGGTCAAATTCAGCAAATTGTGA 1437 0.3883 MDTIYLGWFGLVIGFVLWWWNECWYVVPLKLKCSKSATKLPPGHLGFPFIGEMIIFLWYFKIVRRPDDFINAKRRKYGDGEGMFRTHLFGKPSIIVYTPAVNKFVLFSDTNFKLEWPSVELLGQTSIAAVHGKAHTRVRNCITNAINRPDALSRIAALVQPRQVAALRSWVEMGKINTKVETEKLTLENIGKLFLGKDSGPFINSLDKLYQGVLPGVRAYPINIPGFAYHHALQCRRKLEDIFWMELDKRKNENNVETLIDLMDGLIQIEDSEGGKLSDKEVIDNIVSLVFGGYISTSIVSMWAIYLLAKHPNVLQKLREENMAFKKGSPEEFITTKDVSNLKYTNKVVEEVIRITNVTPFVFRKAVNEVDYKGYKIPKGWNLILLLRYIHTNPENYKDPMYFNPDRWNEPAKPGTYQVFGGGQRLCPGNMLARIQLALMLHHLSIGYKWELINPNANIIYLSHPAPIDGVEVKFSKL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00578 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Trre5g00578 478 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 SUPERFAMILY Cytochrome P450 37 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 Pfam Cytochrome P450 41 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 Gene3D Cytochrome P450 30 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00578 478 PANTHER CYTOCHROME P450 26 38 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00578 Trre-Chr5 3739346 3742485 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00578 4 477 Cytochrome P450 AT2G32440 35.197 3.78e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00578 - - tpra:123916160 936.021