Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00576 ATGTATTTTAATCCTCATAGATGGAATGAGCCAACAAAGCCTGGAACTTACCAAGTTTTTGGTGCTGGAAATAGACTATGCCCTGGAAACATGCTTGCGAGAATTCAACTAGCTCTTCTGCTACATCATTTGTCCATAGGATACAAATGGGAGCTCATTAATCCAAACGCGGATATAACTTATCTTCCACATCCTACTCCTATTGATGGAGTTGAGGTCAAGTTCAGCAAATTGTAA 237 0.3966 MYFNPHRWNEPTKPGTYQVFGAGNRLCPGNMLARIQLALLLHHLSIGYKWELINPNADITYLPHPTPIDGVEVKFSKL 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00576 78 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 20 29 IPR017972 GO:0005506|GO:0016705
Trre5g00576 78 PANTHER CYTOCHROME P450 26 3 67 - -
Trre5g00576 78 Pfam Cytochrome P450 3 56 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00576 78 SUPERFAMILY Cytochrome P450 3 75 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00576 78 Gene3D Cytochrome P450 1 78 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00576 Trre-Chr5 3730956 3731659 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00576 3 77 Cytochrome P450 AT2G32440 39.474 3.20e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00576 - - tpra:123916160 150.599