Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00532 ATGGCTGCAACTATGGTTGGTGATGCATTTCTCTCTGCTTCTGTCAAAACCATGATTGACAAACTAATTTCAGCTGAGTTTCGTGATTTCATCAAAAACAAAAAGCTGAATGTCTCACTCTTGAAGCAGTTACAAACAACGTTGCTGGTTCTTCAAGCAGTGCTGGAAGATGCAGAGGAGAAGCAGATTAACAATTGTGCTGTCAAACAATGGCTTGATGACTTGAAAGATGCTGTCTTTGATGCTGAGGATTTGCTCAACCAAATTAGCTATGATTCTCTGCGATGCAAGGTGGAGAATGACCAAGCTGGAAACGAAACTCATCAGGTGTGGAACTTCCTTTCATCTCCTTTTAACACCTTCTATAGCAAGATCAATTCCCAAATGAAGATCATGTGTGAAAGCCTTCAGCTTTTTGCACAGCATAAAGATATACTTGGTTTGCAAACTAAAAGTGCTAGAGTTTCTCATAGAACTCCTTCAAGTTCGGTGGTTAATGAATCTGTCATGGTTGGTAGGAATGATGATAAAGAGACAATAATGAACATGTTGCTATCAGAAAGCGGCACTAGCAATAACAAAATAGGCGTTGTTGCAATTTTAGGCATGGGAGGTGTCGGAAAAACGACACTTGCACAAATTGTTTACAATCATGAAAAAGTTCTAGAGCACTTTGATCTCAAAGCTTGGGCTTGTGTATCAGATGATTTTGATATTTTGAGAGTAACCAAAGCTCTCCTTGAATCTGTCACTTCAAAAGCATGGGAAAGCAATAATCTTGATTTTCTTCGAGTTGAATTAAAGCAAAATTTGAGGGACAAAAGATTTTTAATTGTGTTGGATGACTTATGGAATGACAATTATAATGATTGGGATGAACTTGTAGCTCCATTGATTAATGAAAAAAGTGGAAGTAGGGTGATCATCACAACACGCCAAGAAAAAGTTGCAATTATTGCACGCACATTTCCAATTCATAAATTAGAACCTCTATCTGATGAAGATAGTTGGTCTTTACTCTCCAAGCATGCATTTGGAGGTGAAGACTTTTGTTGCACTAAATGCCCAAACCTAGAAACGATTGGGAGAAAGATTGCAAGAAAGTGTGGTGGACTGCCTATTGCTGCGAAAACAGTTGGGGGTATTTTGCGTTCAAAGGTAGATACAAAGTATTGGAAAACAATTTTGAAAAGTGACATATGGAAATTAGAGAATGACAATATTCTCCCTGCTTTGCTTCTGAGTTATCAATACCTTCCCTCTCATTTGAAAAGGTGTTTTGCCTATTGTTCAATTTTTCCGAAGGACTATGCACTTGATAGGAAAAAATTGGTTTTGTTGTGGATGGCAGAAGGCTTTCTCGAACATTCTCAAGGTAAAGAATCAGCGGAGCAAGTAGGTGATGAGTACTTTGCCGAACTTTTATCCAGATCATTAATTCAACAATTTCATGGTGATTTTAGAGAACAGAAGTATGTCATGCATGACCTTGTTAATGATTTAGCCACTACTGTATCTGGAAAAAGTTGTTACAGACTTGAATCTGGTGGTGATACCTCTGAAAATGTTCGCCATTTATCATATAATCAAGAATTGTATGAAATTTTAAAAAAGTTTAAGATTTGCTACAAATTCAAATGCTTGAGAAGCTTTCTACCCATTTGCTTCTCGAGGGGAAATTGCTTATCTACCAAGGTGGTTGTTGATTTGCTACCCACACTTACAAGGTTGCGTGTGTTATCAATATCAAGTTATCTTAACATCACCATGCTGCCAGACTCAATTGGCAGTTTGGTACAATTGCGATATCTAAATCTCTCTTATACTAAAATCATAAGCTTGCCTAACACAATATGCAACCTCTACAATTTGCAAACCTTGATTCTATCAGGGTGCTCAAATCTCACTAAATTGCCGGAACGCGTTGGAAAGTTAATTAATTTACGCCACCTTGACATCGATTTAACGAGCATAACAGAGATGCCGAAGCAAATTGTTGAACTAGAAAATCTTCAAACCTTAACTGTTTTTGTAGTAGGCAAGCAAAGCATTGGTTTAAGTATCAGAGAACTTGGAAGGTTTCCTAACCTGCGAGGAAAATTGTTCATCAAGAACTTGGAAAATGTCATTGATGTTGTGGGGGCATATGATACCAACTTGAAGAGCAAAGAACATATTGAGGAATTAACGATACAGTGGGGCAAAGAAACTGATGACTCACTTAAAGATAAAGATGTGCTTGATATGTTACAACCATCTCCAAACCTGAAGAAGTTGAGCATTGACTTGTATGGTGGGACAAGTTTTCCAAGTTGGCTGGGAAATTCTTCATTTTCTAACATGGTGTCCCTTTGCATCAATAACTGTGAATATTGCATGACACTTCCTCCACTAGGGCAACTACCTTCTCTCAAGGACCTGCAAATATCTGAAATGACGATTTTGGAGACAATTGGGGAGGAGTTCTATGGCATAATAGGAGGAGGTTCCAATTCTTCATTCCAACCATTTCCATCCCTTGAGAAGCTGGTAATTGAGGAAATGTCAAATTGGAAGGAGTGGCTTCCTTTTCAAGACAACTTAATTCCTTTTCCTCTTCTTAAAACTCTAGAGTTATCCAAGTGTCCTAAACTTATGGGACATTTGCCTAGTCATCTGCCATCCATAGAAGTAATTGAAATACATGCTTGTGATAATCTCTTGGTAACACCATCTATTCAACCTTGGCTCTCCTCAATAAAAAAAATTGTTATTGGGCGAGATAGGGATTTTGAAAGCAATACTGAAAGCACCCAATGCTTATTGTTTAAGAGTGATTCTCCATGTCTTCTGCAAGGTATAATGATAGAGAGCTGTCATATGCTACTTTCTGTTCCGAAAGTGATTATAAATAACACCTGTCTACAAGAATTGGATCTCCATGGTATTCCGTCTCTCACTGCATTTCCAAAGAAAGGTCTACCCACTTCTCTGCAATCACTTCGTATTTGCAAATGTGACAATTTAACATTCCTACCTCCTGAAACATGGAAAAATTACACATCGCTTGTGAGTCTTGAGTTAGATAGAAGTTGTAATGAACTTACCTCCTTCCCATTGAATGGTTTTCCTATGCTCCAAGATCTTTCCATTTGTGAATGTAGGAGTTTGGAATCTATTTTTATTTCAGAAACTTCTCCCTTTAGCTTCTCAACGCTAAAATATCTTTATGTCTCTTCATGCGAGGCACTTAAATCACTACCTCAACGAATGGACACCCTCACTGCTCTCGAAAGTATAACTCTCTACAATTTTCCAAAATTGAAGTTATCATTCTTGAAACAAGCTGTATTACCTCCCAATTTACGAATCATTGGAGTTAATTCTGTGAGAATAACAAAGCCTGTAACAGAGTGGGGTCTCCAAGGCCTCACTACTTTTTCAAAAATGCGTATTGGAGGTGATGATATTGTTAGCATGTTTCTCAAAGAGCGGAAGCTGCCAATTTCCCTGGTTTCTCTAAACATAATGAATCTCTCTCAAACAAAATCCTTAGAAGGAAATGGACTTCGACGCCTCTCCTCTCTAGGATGCCTTTGCTTTTCTGAGTGTTCAGAGCTTGTGTCATTGCCAGAAAAATCTTTGCCCGCCTCACTGAAAACACTTTATTTTTATGATAGTCCAAGACTAGAGTCATTGCCAGAAGGCAGCCTGTCTTCTTCTCTTGAATTACTGCGCATCGTTGGATGCCCTTTGTTAGAAGAAAGGTATAACCGAAATGAACATTGGTCCAACATTGCTCACATACCTGTCATAGAAATAAATGAACAAGTTACATTATGA 3822 0.381 MAATMVGDAFLSASVKTMIDKLISAEFRDFIKNKKLNVSLLKQLQTTLLVLQAVLEDAEEKQINNCAVKQWLDDLKDAVFDAEDLLNQISYDSLRCKVENDQAGNETHQVWNFLSSPFNTFYSKINSQMKIMCESLQLFAQHKDILGLQTKSARVSHRTPSSSVVNESVMVGRNDDKETIMNMLLSESGTSNNKIGVVAILGMGGVGKTTLAQIVYNHEKVLEHFDLKAWACVSDDFDILRVTKALLESVTSKAWESNNLDFLRVELKQNLRDKRFLIVLDDLWNDNYNDWDELVAPLINEKSGSRVIITTRQEKVAIIARTFPIHKLEPLSDEDSWSLLSKHAFGGEDFCCTKCPNLETIGRKIARKCGGLPIAAKTVGGILRSKVDTKYWKTILKSDIWKLENDNILPALLLSYQYLPSHLKRCFAYCSIFPKDYALDRKKLVLLWMAEGFLEHSQGKESAEQVGDEYFAELLSRSLIQQFHGDFREQKYVMHDLVNDLATTVSGKSCYRLESGGDTSENVRHLSYNQELYEILKKFKICYKFKCLRSFLPICFSRGNCLSTKVVVDLLPTLTRLRVLSISSYLNITMLPDSIGSLVQLRYLNLSYTKIISLPNTICNLYNLQTLILSGCSNLTKLPERVGKLINLRHLDIDLTSITEMPKQIVELENLQTLTVFVVGKQSIGLSIRELGRFPNLRGKLFIKNLENVIDVVGAYDTNLKSKEHIEELTIQWGKETDDSLKDKDVLDMLQPSPNLKKLSIDLYGGTSFPSWLGNSSFSNMVSLCINNCEYCMTLPPLGQLPSLKDLQISEMTILETIGEEFYGIIGGGSNSSFQPFPSLEKLVIEEMSNWKEWLPFQDNLIPFPLLKTLELSKCPKLMGHLPSHLPSIEVIEIHACDNLLVTPSIQPWLSSIKKIVIGRDRDFESNTESTQCLLFKSDSPCLLQGIMIESCHMLLSVPKVIINNTCLQELDLHGIPSLTAFPKKGLPTSLQSLRICKCDNLTFLPPETWKNYTSLVSLELDRSCNELTSFPLNGFPMLQDLSICECRSLESIFISETSPFSFSTLKYLYVSSCEALKSLPQRMDTLTALESITLYNFPKLKLSFLKQAVLPPNLRIIGVNSVRITKPVTEWGLQGLTTFSKMRIGGDDIVSMFLKERKLPISLVSLNIMNLSQTKSLEGNGLRRLSSLGCLCFSECSELVSLPEKSLPASLKTLYFYDSPRLESLPEGSLSSSLELLRIVGCPLLEERYNRNEHWSNIAHIPVIEINEQVTL 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00532 1273 Gene3D - 330 414 IPR042197 -
Trre5g00532 1273 Coils Coil 41 61 - -
Trre5g00532 1273 FunFam Probable disease resistance protein At1g61300 152 322 - -
Trre5g00532 1273 FunFam Probable disease resistance protein At1g63360 416 504 - -
Trre5g00532 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 430 IPR027417 -
Trre5g00532 1273 Gene3D Ribonuclease Inhibitor 1106 1258 IPR032675 -
Trre5g00532 1273 Gene3D - 14 132 - -
Trre5g00532 1273 Pfam Rx N-terminal domain 12 102 IPR041118 -
Trre5g00532 1273 Gene3D Ribonuclease Inhibitor 540 919 IPR032675 -
Trre5g00532 1273 PANTHER DISEASE RESISTANCE PROTEIN RP 43 875 IPR044974 GO:0006952
Trre5g00532 1273 SUPERFAMILY L domain-like 941 1249 - -
Trre5g00532 1273 SUPERFAMILY L domain-like 493 920 - -
Trre5g00532 1273 PRINTS Disease resistance protein signature 619 635 - -
Trre5g00532 1273 PRINTS Disease resistance protein signature 369 383 - -
Trre5g00532 1273 PRINTS Disease resistance protein signature 270 284 - -
Trre5g00532 1273 PRINTS Disease resistance protein signature 197 212 - -
Trre5g00532 1273 Pfam NB-ARC domain 175 397 IPR002182 GO:0043531
Trre5g00532 1273 Gene3D - 151 322 IPR027417 -
Trre5g00532 1273 Gene3D - 415 504 IPR036388 -
Trre5g00532 1273 Gene3D Ribonuclease Inhibitor 935 1105 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00532 Trre-Chr5 3378876 3382697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00532 585 674 WRKY Transcription Factor Family AT4G12020 38.298 2.11e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00532 - - cam:101493845 1507.66