Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00460 ATGGCAGAGCTGATTGCTGGAGCATTTCTTTCTTCTCTCTTTCAAGTCACTCTTGAGAGGTTTTCCTCAAGTGATTTCAAAGACCTCTTCAATAAAGGGTTGGTTGAAAAACTTGAAATCACACTAAATTCTATCAATCAATTGTTGGATGATGCAGAGACAAAACAATACCAAAACCAAAACGTGAAGAATTGGCTTGATCATCTAAAACATGAAGTATATGAAGTAGATCAATTGTTGGATGAGATTGCTACAAATGCACAACAAAAGATCAAGGCAAAACGTTTCCTTTCAACTTTCACTAATCGATTTGAGTCTAGGATAAAAGATTTGCTAGACAAGTTAAAATATCTTGCAGAACAAAATGATGTGTTGGGATTGACACAAAGAAGTTGCACTAGTTATGAAGGTGTTCTTAGCTTGCAATCCTCAAAAATATCACCAACTGCTTCATTAGTGGATGAATCTTGCATATATGGTAGAGATCATGATAAAAATAAAATGATCAACTATTTGCTTTCTGACAATGATAGCGGCAAACGAGTATCGATAATCAGCATCGTGGGTTTGGGTGGGATGGGCAAGACCACCCTAGCTCAGCTTGTCTACAATGACGAGAGGATGGAGAAGCATTTTGAACTTAAAGCTTGGGTCCATGTCTCAGAATCTTTTGATGTTGTTGGACTCACCAAAACAATTCTTAGGTCATTCCATTCTTCTGCTGATGGTGAAGACTTGGATCCACTCAAATGTCAACTACAACAGACACTAACAGGTAAGAAATTTTTGCTTGTTCTAGATGATGTGTGGAATGGGAATGAGGAATGGTGGGAGCAGTTACTACTTCCTTTTTACCATGGATCTCCGGGAAGTAAGATTATTGTGACAACGCGTGACAAGCATGTTGCATTAGTCGTGAAATCCGACCATCAACATCATTTAAAGCAATTGGCGGAGAGTGATAGTTGGAGTTTATTTGTGAAACATGCTTTTCGAGGAAGGAATGTTTTTGAATATCCAAATCTTGAATCAACCGGAAAGAAGGTTGTAGACAAGTGTGGAGGGTCGCCTTTAGCTGTGAAAACATTGGGAAATCTCTTGCAAAGAAAATTTTCTCAAGGTGAATGGTTTAAGATATTGGAGACTGATATGTGGCATGTATCGAAAGGTGATGATGAAATTAACCCGGTATTGAGATTGAGTTACCATAATCTCCCTTCCAATCTAAAGCGTTGTTTTGCCTATTGTTCCATATTTCCTAAGGGTTATGAATTTCAAAAAGATGAATTGATCAAGCTTTGGATGGCAGAAGGTTTGCTGAAATGTTGTGGAAGAGACAAAAGTGAAGAAGAGTTGGGTAATGAATTCTTAGATGATCTAGAGTCCATTTCATTTTTCCAACAATCAATATATTCCCACAATATTATAGTCATGCATGATCTTGTCAATGATTTGGCGAAATCAGAGTCCCGGGAGTTTTGCTTACAAATAGAGGGTGATAGGGTGCAAGATATATCTAAAAGAACGCGTCACATTTGGTGCTCTCTTGATTTGAACGATGGTGCTAGAATATTAAAGCTTATTTGTAAGATTAAGGGATTACGCAGCCTGTCAGTTCACGACCGAGTCTATGGTGAGGAGTACTTCACCATAAGCAAAAATGTGCAACGTGATATATTTTCAAAACTGAAGTATTTACGGATGTTGTCATTTCGTGGTTGTGAACTTACAGAGCTAGCATATGAGATAGGAAATTTAAAGCTTTTGCGCTATCTAGACTTAACAAGCACAGAGATTAAAAGCTTGCCTGATTCCATTTGCAGGTTGTATAATTTACAGACACTGATATTGGAAAAGTGTTTTGAATTGACTGAACTCCCTTCAGATTTTTACAAACTTACTGGTTTATGTCATCTTAATCTTGAATGCATTTATATAAAGAAGATGCCAAAGCAGATTGGGAGGCTAAATCATCTTCAAACACTCAGTCATTTTGTTGTGGGAGAGAATAGTGGTTTTGATATTAAGGAGTTGGATAATCTTAATCATCTTCAAGGAAAACTTACTATTTCAGGGTTGGAAAATGTCACTAATCCCGCAGATGCTGCAGGAGCAAATTTGAAAGATAAGAAACATCTGAAAGAATTGATCATGAATTATAGCGACGATTTCATTTTCAATAACAACGGAAGAGAAGAATTCGATGTCTTGGAGGCTCTTCGACCAAATAGCAACTTGAAGAGGCTCACTATTGAATACTACAATGGCAACTGCTTTCCAAATTGGCTAAGTGGTTTTCATTTACCCAACTTAGTGTCTCTTAAACTGCAGAGTTGTGGACTATGTTCTCATTTGCCGCCACTTGGTCAACTTCCTTGTCTCAAAGAGCTTTCCATTTCACGTTGTGATGGATTAAAGATCATCGGTGAAGAGTTTTACGACAATAATTCAACAATTCTTCCGTTCAAGTCCCTTGAAGTTTTGATTTTCGAACGGATGTATGGTTTGGAGGAATGGTTATGTCACGAAGGGTTTCCTTTGCTCAAAGAGCTTTCTATTATAAATTGTCCTGAATTGACCAGGGCGTTGCCTCAACACCTTCCTTCTTTACAAAAATTAAAGATAAGCAATTGCAACAAGTTGGAGGAATGGTTATGTCTTGAAGGATTTCCTTTCCTTAAAGAGCTTTCTATTATAAATTGTCCCGAATTGAAAAGGGCCATGCCTCAACACCTTCCTTCTTTACAAAAATTGAAGATAAGTAATTGCAACAAGTTGGAGGAATGGTTATGTCGTGAAGGGCTTCCTTTGCTTAAAGAGATTTTTATCAAACATTGTCCCAAATTGAAAAGTGTTCTGCCTCAACACCTTCCTTGTTTACAAATATTAGAGATTTTTGATTGCAAAATGTTGGAGGTATCAATTCCCAAGGGTGACAGTATCATAGAGTTACATCTACATAGATGTGATAGAGTTTTGGTAAATGGATTGCCTACCAGCTTGAAAAAGTTTGTCCTTCATGAAAACCGGTACACTGAGTTCTCCGTGGAGCAAAATCTACTCAACAATACCATTCTTGAAGAGATGGAGTTTGATTTTAGAGGCTTTGTAAAATTTCCTTTTTTGGATTTGCGTTGCTATAATTCTCTTAGTAGACTTTGCATAAAAGGTTGGTGCTTGCCTTCTTTGCCCTTTGCACCACACTTATTCACCAATCTTCATTCTCTCTCATTGTTCGATTTTCCACAGTTGGAATCATTTCCGAGTGGAGGGTTGCCTTCTAACTTAAGCATTCTTGGAATATTCAACTGCCCTAAATTGATTGCTTCGAGAGAGGAGTGGGGTTTGTTCCAGCTCAATTCTTTGAAAGTTTTCGTTGTTAGTGATGACTTTGAAAACATAGAGTCTTTCCCAGAAGAGAATCTGTTGCCACCAAATCTGAATTATCTTTATTTGATAAAATGTTCAAAGCTAAGAATAATGAACTACAAGGGTTTTCTCCACCTCAAATCTCTCGAGGATCTATGTATTCGCAACTGTCCTAGTTTTGAGCGCTTGCCAGAGGAGGGTCTACACAACTCCCTTTCTAGTTTGTGGATTAGTGATTGTCCATTAATTAAGGAGCAGTACAAAAAGGAGGAAGGAGAGCGTTGGCATACAATTCGTCACATCCCTTCGGTGACCATAACTTGA 3693 0.3777 MAELIAGAFLSSLFQVTLERFSSSDFKDLFNKGLVEKLEITLNSINQLLDDAETKQYQNQNVKNWLDHLKHEVYEVDQLLDEIATNAQQKIKAKRFLSTFTNRFESRIKDLLDKLKYLAEQNDVLGLTQRSCTSYEGVLSLQSSKISPTASLVDESCIYGRDHDKNKMINYLLSDNDSGKRVSIISIVGLGGMGKTTLAQLVYNDERMEKHFELKAWVHVSESFDVVGLTKTILRSFHSSADGEDLDPLKCQLQQTLTGKKFLLVLDDVWNGNEEWWEQLLLPFYHGSPGSKIIVTTRDKHVALVVKSDHQHHLKQLAESDSWSLFVKHAFRGRNVFEYPNLESTGKKVVDKCGGSPLAVKTLGNLLQRKFSQGEWFKILETDMWHVSKGDDEINPVLRLSYHNLPSNLKRCFAYCSIFPKGYEFQKDELIKLWMAEGLLKCCGRDKSEEELGNEFLDDLESISFFQQSIYSHNIIVMHDLVNDLAKSESREFCLQIEGDRVQDISKRTRHIWCSLDLNDGARILKLICKIKGLRSLSVHDRVYGEEYFTISKNVQRDIFSKLKYLRMLSFRGCELTELAYEIGNLKLLRYLDLTSTEIKSLPDSICRLYNLQTLILEKCFELTELPSDFYKLTGLCHLNLECIYIKKMPKQIGRLNHLQTLSHFVVGENSGFDIKELDNLNHLQGKLTISGLENVTNPADAAGANLKDKKHLKELIMNYSDDFIFNNNGREEFDVLEALRPNSNLKRLTIEYYNGNCFPNWLSGFHLPNLVSLKLQSCGLCSHLPPLGQLPCLKELSISRCDGLKIIGEEFYDNNSTILPFKSLEVLIFERMYGLEEWLCHEGFPLLKELSIINCPELTRALPQHLPSLQKLKISNCNKLEEWLCLEGFPFLKELSIINCPELKRAMPQHLPSLQKLKISNCNKLEEWLCREGLPLLKEIFIKHCPKLKSVLPQHLPCLQILEIFDCKMLEVSIPKGDSIIELHLHRCDRVLVNGLPTSLKKFVLHENRYTEFSVEQNLLNNTILEEMEFDFRGFVKFPFLDLRCYNSLSRLCIKGWCLPSLPFAPHLFTNLHSLSLFDFPQLESFPSGGLPSNLSILGIFNCPKLIASREEWGLFQLNSLKVFVVSDDFENIESFPEENLLPPNLNYLYLIKCSKLRIMNYKGFLHLKSLEDLCIRNCPSFERLPEEGLHNSLSSLWISDCPLIKEQYKKEEGERWHTIRHIPSVTIT 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00460 1230 Gene3D Ribonuclease Inhibitor 518 901 IPR032675 -
Trre5g00460 1230 FunFam Probable disease resistance protein At1g61300 141 311 - -
Trre5g00460 1230 Gene3D - 316 401 IPR042197 -
Trre5g00460 1230 PRINTS Disease resistance protein signature 865 881 - -
Trre5g00460 1230 PRINTS Disease resistance protein signature 184 199 - -
Trre5g00460 1230 PRINTS Disease resistance protein signature 353 367 - -
Trre5g00460 1230 PRINTS Disease resistance protein signature 256 270 - -
Trre5g00460 1230 PANTHER DISEASE RESISTANCE PROTEIN RP 35 856 IPR044974 GO:0006952
Trre5g00460 1230 Pfam NB-ARC domain 162 402 IPR002182 GO:0043531
Trre5g00460 1230 Gene3D Ribonuclease Inhibitor 909 990 IPR032675 -
Trre5g00460 1230 Gene3D - 143 312 IPR027417 -
Trre5g00460 1230 SUPERFAMILY L domain-like 955 1208 - -
Trre5g00460 1230 Gene3D - 30 122 - -
Trre5g00460 1230 Pfam Rx N-terminal domain 10 92 IPR041118 -
Trre5g00460 1230 SUPERFAMILY L domain-like 477 946 - -
Trre5g00460 1230 Coils Coil 35 55 - -
Trre5g00460 1230 Gene3D - 402 490 IPR036388 -
Trre5g00460 1230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 416 IPR027417 -
Trre5g00460 1230 Gene3D Ribonuclease Inhibitor 1006 1213 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00460 Trre-Chr5 2866472 2870164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00460 158 370 WRKY Transcription Factor Family AT5G45050 27.442 1.17e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00460 - - mtr:11416242 1492.63