Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00429 ATGGGCAGAGAAATTGTGAGGCAGGAGTCAACATTGGAGCCTGGAAGACGCAGTAGATTATGGTTTAGTGATGACATTGTTCATGTTTTGGAAGAAGACAAGGGAACTGATACAATTGAAGTCATAATCATCGACTTGCATAAAGACAGAAAAGTGAACTGGTGTGGAGATGCTTTTGGGCAGATGAAGAACTTGAGAATTCTTATAATTAGAAATGCACAATTTTCCATAGGTCCTCAAATTCTTCCAGATAGCTTGAGAGTGCTTGATTGGTGTGCATATCAATCGCCCTCTTTACCATCCGAGTTTAATCCCAAGAATCTTGCAGTGTTTCAGACACTGAGCTTTCTGAATTTTGAAGGCTGCAAGTTCCTAATTGAAGTACCTAGTTTATCTAGTGCACCAAATTTGGGGGCATTATGTCTTGATGACTGCACCAATTTAATTAGAATCCATGATTCAGTTGGGTTTCTTGACAAACTTGTTTCATTAAGTGCTCAAGATTGCACCCAACTAGAAAGTTTGGTTCCTTCCATCAATTTGCCATCTTTAGTTACTTTAGATCTAAGTGGTTGCTCATGTCTTGAGAGGTTCCCAGAAGTAGTAGGAGTGATGGAGAATATAAAACATGTTTATTTAGACCACACTCGCATAGAACAATTGCCTTGTACAATTGGAAATCTTGTTGGTCTCCAACGTTTGTTCTTGAGGGGATGCCAAATGATGGTTCAGCTACCAAACTACATATTACCTAAAGTTGAGATAATAACAGCTTATGACGGTAGGGGATTTCAATCATCTGAAAATGAAGAAAAAGTGAATCCAAAAGTGTTTGCAAATGCCATGTGTGTTTATAATGAATATGGGAAGACCTTGCTTAATGTGTATTCTAGTAACAATTGCTCCAACGATGTCATAGAAGTATGTAGTCCTTTGGAAAATGACGGTGGAAAAAATCTTGTGATTGATGAATTTGAAACAACTCTTTTTAGGTACAGAGAGGGGAGAATAAAACTGGGTAAGCTTAGAAGGAATGAATCATCAATGTGTTTTTGGTTCCGAAAGAAATTCCCCAAGGTAGCTCTATGGTTTTTTGTAGAATCCGAGAGAAATAAATCCGGAAAGGATTTCAAGTTGAAAGTACTCATCAATGGCACTACTCAACTCACTTCTTCATGCGAATACATATTTTATTCACAAAAAGAGACTGAACATATGCTTTGTTGTGATCTACAATCCAATGTGGAGGGTGTTTTTTCAGAGAATGAGTGGAACTGGGTGGAGATTTTATGTGAGATGGAACATCTAATTCCCTATGATTCTGAAAGGGTCATGGCCCGCCAGGATTGGACCACTAAGACGATTCTAAAGTGGTCTCTCCTATATGTGTACCCAGAAAAAGAAGAGAATGATTTCAACTTATTTGACATTCTTGATTCTCCTTCTGTTTCAAAAAAACGAGATTATCTAGCTCTTCTATATGCAGTGGAAAATGCTGAAGTGATTCTAAAAGGGTCATGGCCCACCAAGATTAGACCACTAAGAAGCTGGGCAATGTCAGAAGCAGGAGCTGATGCAACCAAAGCGCAAGAAGATGAGGCGGCGCCAATTCTTGTCCCAGGGAAGAATTTTGAGACTGCTGCTGAGGAGGAAACTAAGGCTTAA 1665 0.3898 MGREIVRQESTLEPGRRSRLWFSDDIVHVLEEDKGTDTIEVIIIDLHKDRKVNWCGDAFGQMKNLRILIIRNAQFSIGPQILPDSLRVLDWCAYQSPSLPSEFNPKNLAVFQTLSFLNFEGCKFLIEVPSLSSAPNLGALCLDDCTNLIRIHDSVGFLDKLVSLSAQDCTQLESLVPSINLPSLVTLDLSGCSCLERFPEVVGVMENIKHVYLDHTRIEQLPCTIGNLVGLQRLFLRGCQMMVQLPNYILPKVEIITAYDGRGFQSSENEEKVNPKVFANAMCVYNEYGKTLLNVYSSNNCSNDVIEVCSPLENDGGKNLVIDEFETTLFRYREGRIKLGKLRRNESSMCFWFRKKFPKVALWFFVESERNKSGKDFKLKVLINGTTQLTSSCEYIFYSQKETEHMLCCDLQSNVEGVFSENEWNWVEILCEMEHLIPYDSERVMARQDWTTKTILKWSLLYVYPEKEENDFNLFDILDSPSVSKKRDYLALLYAVENAEVILKGSWPTKIRPLRSWAMSEAGADATKAQEDEAAPILVPGKNFETAAEEETKA 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00429 554 SUPERFAMILY L domain-like 41 260 - -
Trre5g00429 554 Gene3D Ribonuclease Inhibitor 42 260 IPR032675 -
Trre5g00429 554 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 269 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00429 Trre-Chr5 2691122 2693707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00429 2 249 WRKY Transcription Factor Family AT4G12020 35.943 8.45e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00429 - - mtr:11415136 645.195