Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00419 ATGGAGAACTATAATAAGGTGCTAATGCTAATTGTGTGTACTTTCTTCTTTTGCTCCAAGCCTACTTTCTCTAATCAGAATACTCTTACTACAAATCAGTTTATCCGATACAATGATACCCTTGTTTCTGCAGCTGGAACTTTTGAAGCAGGATTTTTCAACTTTGGTGATCCACAACGCCAATACTTTGGTATATGGTACAAGAGCATATTACCTAGGACTATTGTGTGGGTTGCCAATAGAGACATGCCAGTACAAAACTCAACAGGAATGCTGAAACTCACTGATCAAGGAAGTCTTGTTATTCTTGATGGCTCCAAAGGCATTATCTGGAACTCCAATTCATCAAAAATTGGAGTGAAACCAGTTGTTCTACTTTTGGATTCAGGAAATCTGGTTGTAAAAGATGCAATCAACACCGAGAACTTTTTGTGGGAAAGTTTTGATTATCCTGGTAATACTCTACTTGCTGGAATGAAGCTGAAAAGTAATTTAGTTACCGGTCCATATAGATATCTCACATCTTGGAGAAGCCCTGAAGATCCTGCTCCAGGGGAGTTTTCATATAGGATAGATATACATGGTTATCCTCAACAGGTTACTACAAAGGGAGCAACAATTCTGTATAGAGGAGGGTCATGGAATGGAATTCTTTTCACTGGTGTTTCTTGGCTAAGAAAGCATAGAATCTTGAATTTCTCATTAGTAGTCATTGGCAAAGAACTCTCTTATCAATACGAAAGTCTGAACAATTCAATTATTACTAGAATGGTGCTAGATCCATATGGAACTTCACAACGTTTTATATTGTCAGATAGGACACACATTTGGGAGCCTATATCTTCTCGTCCTGCAGACCAGTGTGATGATTATGCCATCTGTGGTATCAACTCTAACTGCAATATTAATGCATTTCCGATATGTGAATGCTTGGAAGGTTTCATGCCAAAATCGTCGAATTGGTCTGATGGGTGTGTAAGGAAAACACATTTAAATTGTCTCCATGGAGATGGATTTTTACCGTACACAAACATGAAGTTGCCTGATACATCAACATCGTGGTTTGACAAGAGCATGACCCTTAAGGAATGTAAGACAATGTGTTTGAAAAACTGTTCTTGCACTGCATATACAAATTTAGATGTCAGAGACGGGAGTGGCTGCTTACTTTGGTTTGACTATATTGTGGACATGAGAATACATCCAGATCAAGGACAAGAAATTTACATACGACTGGCATCTTCGGAACTTGATCATAGTAAGAATAAGAGGAACTTCAAGCGTGCTGGGATTCTTGCAGGAGTTATTACATTGGTTATAGGACTAACTGTTTTTGTATTGCTCACATCAGTGTATAGAAAGAAGCTTGGGTATATAAAAAATTATTTAACTGGAACCATCACAAAGGCAACAAATAACTTCTCCAACAGAAACAAGTTAGGACAAGGTGGTTTTGGACCGGTGTACAAGGGCATAATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTGTCTAAAACATCAGGACAAGGAACTGAGGAATTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGCAATCTTGCAAAGCTTATTGGTTGTTCTATTCAACAAGATGAAAAGTTGTTGATCTATGAATTCTTGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACTACACGAAGCAAATTACTAGATTGGACTAAGCGCTTGGAAATTATCAATGGGATTGCTCGGGGACTGCTCTATCTCCATCAAGATTCTACACTAAGAATCATACATAGAGATGTCAAAATAAGCAATATTCTTCTTGATATTGATATGATCCCGAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCAAATACAAATACAGTGACGGGAACACATGGGTATATGCCTCCAGAATATGCAGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTCGTTGTCCTTGAGATAATCAGCGGTAAGAAGAATAGCGGATTTTGTGACCCTCGACATCGTCTAGACCTTCTTGGGCATGCATGGAGACTCTGGATTGATGGAAGGCCAGAGGAGTTAATAGCCGACATATTATATGATGAGGGGATATGTTCAGAAATAATAAGATTTATTCATGTTGGTCTATTGTGTGTACAACAGCAACCAGAAAATAGGCCTAACATGTCATCTGTGGTCTTTATGTTAAAGGGTGAAAAGTTACTTCCCGAACCAAGTGAACCCGGGTTCTATGCAGGAAGAAACCATACGAATAGCACAGAATTTTCTATAAATGAAGCTACAATCTCATTGTTAGAGGCTCGATAG 2355 0.3847 MENYNKVLMLIVCTFFFCSKPTFSNQNTLTTNQFIRYNDTLVSAAGTFEAGFFNFGDPQRQYFGIWYKSILPRTIVWVANRDMPVQNSTGMLKLTDQGSLVILDGSKGIIWNSNSSKIGVKPVVLLLDSGNLVVKDAINTENFLWESFDYPGNTLLAGMKLKSNLVTGPYRYLTSWRSPEDPAPGEFSYRIDIHGYPQQVTTKGATILYRGGSWNGILFTGVSWLRKHRILNFSLVVIGKELSYQYESLNNSIITRMVLDPYGTSQRFILSDRTHIWEPISSRPADQCDDYAICGINSNCNINAFPICECLEGFMPKSSNWSDGCVRKTHLNCLHGDGFLPYTNMKLPDTSTSWFDKSMTLKECKTMCLKNCSCTAYTNLDVRDGSGCLLWFDYIVDMRIHPDQGQEIYIRLASSELDHSKNKRNFKRAGILAGVITLVIGLTVFVLLTSVYRKKLGYIKNYLTGTITKATNNFSNRNKLGQGGFGPVYKGIMVDGQEIAVKRLSKTSGQGTEEFKNEVKLMATLQHRNLAKLIGCSIQQDEKLLIYEFLPNRSLDYFIFDTTRSKLLDWTKRLEIINGIARGLLYLHQDSTLRIIHRDVKISNILLDIDMIPKISDFGLARSFMGDQAEANTNTVTGTHGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNSGFCDPRHRLDLLGHAWRLWIDGRPEELIADILYDEGICSEIIRFIHVGLLCVQQQPENRPNMSSVVFMLKGEKLLPEPSEPGFYAGRNHTNSTEFSINEATISLLEAR 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00419 784 Gene3D - 22 148 IPR036426 -
Trre5g00419 784 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 736 - -
Trre5g00419 784 CDD PAN_AP_plant 329 413 - -
Trre5g00419 784 Pfam D-mannose binding lectin 74 177 IPR001480 -
Trre5g00419 784 Pfam Protein tyrosine and serine/threonine kinase 477 742 IPR001245 GO:0004672|GO:0006468
Trre5g00419 784 Gene3D Phosphorylase Kinase; domain 1 450 549 - -
Trre5g00419 784 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Trre5g00419 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 332 412 - -
Trre5g00419 784 SMART ntp_6 334 412 IPR003609 -
Trre5g00419 784 Gene3D Transferase(Phosphotransferase) domain 1 550 751 - -
Trre5g00419 784 ProSiteProfiles Protein kinase domain profile. 474 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g00419 784 Pfam PAN-like domain 333 398 IPR003609 -
Trre5g00419 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 550 753 - -
Trre5g00419 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 182 IPR036426 -
Trre5g00419 784 SUPERFAMILY Protein kinase-like (PK-like) 459 745 IPR011009 -
Trre5g00419 784 PIRSF SRK 2 784 IPR024171 GO:0004674
Trre5g00419 784 SMART serkin_6 474 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g00419 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Trre5g00419 784 ProSiteProfiles PAN/Apple domain profile. 333 413 IPR003609 -
Trre5g00419 784 CDD STKc_IRAK 480 747 - -
Trre5g00419 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 453 549 - -
Trre5g00419 784 Gene3D Hepatocyte Growth Factor 330 415 - -
Trre5g00419 784 CDD B_lectin 27 151 IPR001480 -
Trre5g00419 784 SMART blect_4 32 151 IPR001480 -
Trre5g00419 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 148 - -
Trre5g00419 784 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00419 Trre-Chr5 2649001 2652749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00419 467 759 Receptor kinase-like Gene Family AT4G23230 58.844 3.59e-117 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre5g00419 PK_Tyr_Ser-Thr 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00419 - - tpra:123915365 1291.56