Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00372 ATGGAATACAACAAGTTCAGAATCCGAAGCTATGATGAGTGTCAATCTGATAGAATTCAAGTTGAAAATCTTGAGAGAAAATGTGAGGTAGGACCATCACAAAGTGTGTTTCTCTTCACAGACACTATAGGTGACCCCATTTGTAGGATTCGAAACAGTCCCATGTTTATGATGCTGGTAGCAGAATTTGAAAATGGATTGGTTGGTATCATTCAAGGCTCTATAAAAGTTGTAACTATTCAAGGACATCCACCAAAAGATTTGGCAAAAGTAGGGTATGTCCTAGGCTTAAGGGTATCTCCACATCATAGAAGAAAGGGGATTGGTTCAAGTCTAGTAAGAAAATTAGAAGAATGGTTCATTTCCAATGATGTGGACTATGCATATATGGCAACTGAAAAAGAAAATCATGCCTCAGTTAATCTCTTCATGAACAAATTTGGCTACACAAAATTTAGGACACCATCAATTCTTGTTAACCCTGTTAACCATCATTCATTTAAAATCTCAACTAACATTGAAATATCAAGGTTGAAAATTGAACAAGCTGAATCACTCTATAGAAAGTTCATGGGGTCCACAGAGTTTTTTCCTAATGATATAGGAAATATATTAAAAAATAAGCTAAGTTTAGGGACATGGATGGCATATTTTAAAGATGATATTAATATTGGGCCTAATGGACAAGTACCAAATAGTTGGGCTATGATTAGTGTTTGGAATAGTGGTGAAATTTTTAAGTTAAAGATAGGAAAAGCACCTTTTTATTGTTTGTTATACACAAAAAGTTGGTGCTTGATTGATAAAATTTTCCCATGTTTAAAATTACCTACTTTGCCTGATTTTTTTAACCCTTTTGGATTTTATTTTATGTATGGTGTGTATCATGAAGGGCCATTTTCAGGGAAGCTAGTGAGAGCTTTGTGTAAATTTGTGCACAACATGGCTAAAGAGTCTAAAGATGATGAGAAGTGTAAAATTATCGTGACTGAAGTTGGAGGAAGAGATGAACTCAATCATCACATTCCACATTGGAAATTGCTTTCATGTCCTGAAGATTTGTGGTGTATAAAGGCATTGAAAAGTGAAGGGCTTTCAATCAATACTTTTCATGAATTAACAACTAAAACCCCACCAACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1173 0.3461 MEYNKFRIRSYDECQSDRIQVENLERKCEVGPSQSVFLFTDTIGDPICRIRNSPMFMMLVAEFENGLVGIIQGSIKVVTIQGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVRKLEEWFISNDVDYAYMATEKENHASVNLFMNKFGYTKFRTPSILVNPVNHHSFKISTNIEISRLKIEQAESLYRKFMGSTEFFPNDIGNILKNKLSLGTWMAYFKDDINIGPNGQVPNSWAMISVWNSGEIFKLKIGKAPFYCLLYTKSWCLIDKIFPCLKLPTLPDFFNPFGFYFMYGVYHEGPFSGKLVRALCKFVHNMAKESKDDEKCKIIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKALKSEGLSINTFHELTTKTPPTRALFVDPREV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00372 390 Gene3D - 39 156 - -
Trre5g00372 390 CDD NAT_SF 58 129 - -
Trre5g00372 390 Pfam Acetyltransferase (GNAT) family 49 149 IPR000182 GO:0016747
Trre5g00372 390 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 390 - -
Trre5g00372 390 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 17 153 IPR016181 -
Trre5g00372 390 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 174 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00372 Trre-Chr5 2364098 2365694 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre5g00372 Acetyltransf_1 3.6e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00372 - - psat:127084517 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g00372 5 2364098 2365694 Trre5g00372 5 2364098 2365694 ECH