Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00354 ATGGCTTCAGCATTGGAATGTTGGTCAAGACGAGGCAACAACAACAACCACAACAACAACAACGATGAAGAAGATATGGTAGAACAAGTTCTAATGGAAACAAACCCATCTTCACAACATAACAACAAAGACTCTTCAATCATTCACAAGAAGTTTAACAAACTTACTCGTAATGTTTCTGAAGCTATTGCTTCACTAAAAAACACTCTCAACATTAACCTTAATCTTGATTCTTCCAAACCCGACAACAACAACAACAGCACTTGTCGAAGTAGTAACAATAACCTCGTTTGGGGAACTGTTGTGAGAAATCTTACTCAGCTTTATCCTGGTAGTCAACTTCCTGAGAAGCTCATGTCCAACATTCGCAAACACTATGATTCTTTGCCTCCTAGTTATTCTCAGGCCGGTTTTGATGTTAAAGATGTGTTTCTTCACATCAAGCTGATTGAGCAAACTTTGGAAGATTCACAAGCTGCAATTTTGATTGAAGAAGAGTGTGACGGTGAAATGCAGCTTCAAGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCAATTTCGTGGCCTGCGATGTCGAGTGCATTGGATAGTTCCTCCATTTGTTGTAAGAAGATTCAGATCTTTGAGAAGAAAGGTCTCACCCTTGGAATTGTACTTCTACTTGTTCTCTCTGGGGCCGGACAAGATAAGTTGGTAAGGACTCGAGTTGAAAGTGCTCTTAAGTTTGCCATGAAGAAGCCTAAAGCCAGTGTTGTGAAGCTTCCTTTTGGACTTTGTGGATGTCAAGAGGAGAATTTCAAGGGGAGAGAATTTGGAGAGATTGAAGAGAATTGTAGCGGTGTATACTGCGGAAACGGATATGAGAATTTGAGCCAAAAAATTCATCTCGAAATGCCATTGCCTAATTCATTGTTTCATGTATCGGTAGATGAGTGGCAGACTATTCTGACAGATGCTGATGAGATGCAAAAATGGTTGTTAAACTCGGATAGTCTTGAGTTCTCGGAACAGATCGGACACAATTCGTATAAAGGATCCTACATGGGGAAAAAAGTTGGCATTGAGAAGCTCAGAGGGTGCGACAAAGGGAACTCGTATGAGTTTGTGCTCAGGAAAGATCTGCTAGAACTGATGACGTGCGGACATAAAAATATTCTGCAGTTTTGTGGTGTTTGTGTAGATGACAATCATGGGTTATGCGTAGTGACGAAATTCATGCAAGGTGGATCTGTTCATGACTTGATTTCAAAGAACAAGAAACTTCAGAACAAGGATATTGTAAGAATTGCCGTTGATGTGGCCGAGGGGATCAAGTTTATGAATGATCACGGTGTTGCGTATAGAGACCTTAATACTCAGAGGATTATGTTGGATAAACATGGGAGTGCTTGCTTGGGAGATTTGGGTATAGTCACTGCCTGCAAGAGCAACCAAGAAGCAATGGATTACGAAACTGATGGTTACCGGTGGCTAGCTCCGGAGATAATTGCCGGCGACCCTGAGAGTGTCACCGAGACATGGATGAGCAATGTTTATAGTTTCGGCATGGTAATTTGGGAGATGGTATCCGGTGAAGCAGCCTATACTGCATATTCACCTGTGCAGGCAGCAGTAGGCATTGCAGCTTGTGGCCTTAGACCTGAGATCCCAAAGGACTGTCCACAAATTCTAAAATCTCTAATGACAAAATGCTGGAACAACACCCCTTCAAAACGCCCCGAATTCTCCGAAATATTAGCTATACTGCTGCGACACAACAACAACAAGTAA 1776 0.42 MASALECWSRRGNNNNHNNNNDEEDMVEQVLMETNPSSQHNNKDSSIIHKKFNKLTRNVSEAIASLKNTLNINLNLDSSKPDNNNNSTCRSSNNNLVWGTVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPPSYSQAGFDVKDVFLHIKLIEQTLEDSQAAILIEEECDGEMQLQGSLFKLTFACNSPISWPAMSSALDSSSICCKKIQIFEKKGLTLGIVLLLVLSGAGQDKLVRTRVESALKFAMKKPKASVVKLPFGLCGCQEENFKGREFGEIEENCSGVYCGNGYENLSQKIHLEMPLPNSLFHVSVDEWQTILTDADEMQKWLLNSDSLEFSEQIGHNSYKGSYMGKKVGIEKLRGCDKGNSYEFVLRKDLLELMTCGHKNILQFCGVCVDDNHGLCVVTKFMQGGSVHDLISKNKKLQNKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRIMLDKHGSACLGDLGIVTACKSNQEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVSGEAAYTAYSPVQAAVGIAACGLRPEIPKDCPQILKSLMTKCWNNTPSKRPEFSEILAILLRHNNNK 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00354 591 Pfam Protein tyrosine and serine/threonine kinase 374 583 IPR001245 GO:0004672|GO:0006468
Trre5g00354 591 PRINTS Tyrosine kinase catalytic domain signature 511 533 IPR001245 GO:0004672|GO:0006468
Trre5g00354 591 PRINTS Tyrosine kinase catalytic domain signature 555 577 IPR001245 GO:0004672|GO:0006468
Trre5g00354 591 PRINTS Tyrosine kinase catalytic domain signature 441 459 IPR001245 GO:0004672|GO:0006468
Trre5g00354 591 PRINTS Tyrosine kinase catalytic domain signature 405 418 IPR001245 GO:0004672|GO:0006468
Trre5g00354 591 Gene3D Transferase(Phosphotransferase) domain 1 327 589 - -
Trre5g00354 591 MobiDBLite consensus disorder prediction 1 22 - -
Trre5g00354 591 ProSiteProfiles Protein kinase domain profile. 334 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g00354 591 SUPERFAMILY Protein kinase-like (PK-like) 309 584 IPR011009 -
Trre5g00354 591 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 57 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00354 Trre-Chr5 2201947 2205024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00354 321 584 MAP Kinase Kinase Kinase AT2G17700 32.841 5.36e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Trre5g00354 PK_Tyr_Ser-Thr 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00354 - - gmx:100811417 905.59