Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00291 ATGGACGCTCTTTCTAGCATAGCGTCAAATGTGGCCTTACCTCTCCTACGACAATTTACTTATGTGTTGATGTACAACAGTTACCTCATTGAACTCGAGACTGAAATTCAGAAGCTGCAGAGGGAGGAGAAAGAAATGAAGCACAGTGTTGAAGCTGCAAAAAGGAATGGTGAAGAGATTGAAGACACGATCCGTGACTGGTTTTCTAGAGTGCAAGCATCCATAGAAGAAGCACAAACATTCCTTCGAGGCGAAGACAAAGAAAGAGTTGGATGCTTAGATGTGTACTCGAGGTACACGAACAGTCAGAGAGCAAAAAGCCTGGTGGATATTCTTTGTGAAATCAGAAAAGAAACATTTGATAGAATTTCATACCGTTGTGCATTGAAATGCAATTTCAGTTCTAGTGCTAGAGGTTATGTGGATTTGGAATCAAGAACAACAATGTTGAATGAAATTTTGAATGTCTTAAAAGTGGATTCTACTGTTCACATGATTGGAGTGTATGGAATGGCTGGTGTAGGTAAAACTGCATTGGTGAAGGAGCTAGCATGGAAAGCCGAGAAAGATGGTATATTCGACGTGGTTGTGGTGGCTAATGTGACAAATTCTCCTAACATGGGAACAATTCGAGCCGAAATAGCTGATGGGTTAGGGCTTAAGTTTGATGAGCTGACTGAGGTTGGACGGGCGAGTCGGTTACGTCAAAGGATTAGGCAGGAGATGAAGATTCTTGTGATATTGGACGATATTTGGGGAAAGCTTAGTTTAACCGAGGTTGGTGTTCCTTTTGGCGACGATCATGAGGGTTGCAAAGTGTTGGTAACATCCAGAGATCTTAGTGTGTTGACTACTGACTTAGGTGCAAAGAAAGTTTATAGGCTTGAAGTTTTGTCCGATGATGAGAGTTGGAAATTGTTTGAAAAGAGGGGAGAGAATGCTGTTAAAGATCTTAGCATTCAACCTGTAGCAATGAAAGTAGCCAAAAATTGTGCTGGTTTGCCGCTTTTGATTGTTAATTTGGTGGAAGCATTGAAGAACAAGGACTTGTATGCTTGGAAGGATGCACTCGAGCAGTTAACAAATTTCGACTTTGATGGATGTTTCTATTCTAAAGTGTATTCAGCTATTGAACTAAGTTATGATTATTTAGAAAGTCAAGAACTCAAAACATTCTTCCTTCTTTTAGGTTCAATGGGAAATGGTTATAACATAAAAGATTTGTTGGTGTATGGTTGGTGTTTAGGTTTGCATAAACATGTCGATACATTGGCAGATGGAAGAAACAGACTTCACAAATTGATAGACAATTTGAGAGATGCATGTTTTCTGCTTGAAGGTGAAAGAGATTCGGTTGAGGCGCTTGAAGTTGTTCGCGTTGTGGCTGCCTCCATTGCATCCAAGCTCAAGCCGTTGTTTGCTGTGGAGAGAAACGCCAAATTGAAAGAATGGCCAAGAAAAGATTTTTTGAAAAATTGTCATCATATTTTCTTGGATTGGTGTTTGATCGATGAACTTCCTGAGAGGTTAGATTGTCCTAACTTGAAGATACTCAAACTCCACTCTCAAGGTAACCATTTGAAAGTTCATGATAATTTCTTCGATCAAATGAAAGAACTTAAGGTACTAAGTTTAGGAGGTGTGAATTGTACTCCGTCACTTCCTTCATCTCTTGCTCTTTTGACAAACCTCCAAGCGCTCGCTCTTTGTAAATGTGTGTTGGAAGACATTTCTATTGTCGGAGAAATCACAAGTTTGGAGATTCTTAATCTCGAAAAATCTGACCTTAGAGTGATCCCTCCTGAAATACAAAAATTGATAAATCTAAGATTGCTCAACTTGACCGATTGCTCGACACTAGAAATAGTACCTCGCAATCTGCTATCAAGCCTGACAAGCTTAGAAGAGCTCTATATGGGGATCTCTAATGTACAATGGGAGGTGAAGGTTAAAGAAATTGAAGACCTAAACAAAATTTCAATTCTAAGTGAGTTGAAAAATTTGCATCAACTATCAACTTTGAATATGCACATAAATGATGCTTCACTTTTTCCTCGAGACATGCTTTCCTTTGGAAGACTAGAAAGTTACAAGATTTTGATTGGTCAAGGATGGAAATTTTCTGAGGAGGAGTCTGAGAACTACAAAAGTTCGAGAATTCTTAAGCTCAATTTGAGCACGGATCCAAGAATCCTCATGGATTACGGAATAAAAATGTTGATGAATCGCGCTGAAGATTTGTATTTAGCTGAACTGAAGGGTGTCAAGGAAGTACTTTATGAATTGAATGATGAAGGATTTTCGCGATTGAAGCATCTTAATATTCAAAGTTGTGAAGAACTGGAGAGCATTATTGGATCAACCATATGGTCTCATCATGATCATGCTTTTCCCAACTTGGAATCTTTGATCCTTCATAATGTGATGAAATTGGAGAGAATATGCAGTGAACCACTTCCAGCACAGGCTTTTGCAAAACTACAAATTGTTAAAGTGAAAAATTGTGATATGATGGAGTTTGTTTTCTTGCATTCAATGGTTCAACACCTTTCAGAACTTGTTGAAATTGAGATTTCTGAATGTAGAATTATGAATTATATCATAGCCAAGCAAAGACAAGAGGATGAAGGAGAAACTGACAAGATCGCACTCCCAAAGTTGCGTTCGCTAACACTTGAATCTTTACCTTCCCTTGTTAGTCTCTCTCCTGAGTCATGCATTAAGGATAGTGAAAACAACAATGATTTCTCCAGTCAACTTTTGAGTGATAAGGTTGAATTTCCATGTTTGGAGACCTTGAAGCTTCACTCAATCAATGTCCAGAGGATATGGGATGACCAACTTTCAGCACATTCTTGCTTTGAAAATTTGACCAAATTGACTGTAGATGGTTGTGAAAAGTTGAAATATCTAGTTTCATACTCAGTGGCTGAAAGACTTGTCAAACTTGAACATCTTTCAATTAGTTCATGCAAATTGGTAGAGGAGATATTTGTCCCTGATGAAATTATGAGTCGCATTGCTCATGTCCATGATGAAATTATGAGTCACATTCCTCATATTAGAAAATCTTCACATGTTGAAATGGTTCCAATTTTCCCCAACTTGGAGACATTAGTGATTTCTAACATGGACAACTTGAAGTCAATATGGCCCAACCAACTCACTCAGAATTCATTTTGCAAGTTGAAAAAAATGGAAATCACATCATGTGACCAGCTTTTGAATGTGTTCCCAAGTCATGTGCTAAACAAATTACAAAGCATGGAATCATTGAGTATAAGCAACTGTGTTGCACTAGAAGTTGTATATGAAATAGATGCTATAAGAGAAGAAGAAGAGCTTGAAATTTCACTGAGGACTTTATCTTTAGGAAATTTACCAAATCTAAAGTATTTGTGGAATAAGGATCCTCAAGGAAATATCAAGTATCAAAACTTGTTTATGGTTAAAGTAACAAAATGTGAAAGTCTAAAACATATGTTTCCATTTTCTGTGGCTAAAGATCTTTTGCAACTACAAGTCCTTGAGATAAGTGATTGTGGTGTAGAAGAAATTATTGCAAAGGATCAAGGAGATGATAAAAAGGAACATGTTGGACTTGTTTTCACAAGATTAGTGTCTTTGAAGTTTTTGAATTTGCAAGAACTTAGATGCTTTTGTAGTGGAAATCACAACTTTAGATTCCCAATGTTGAATAAATTATATGTGGTTGAGTGTCCTAAAATGGAAACTTTCTCTCATGGTATCTTAAGGGCATCAATTCTTAGAAGAATATGTTTGAATCAAAATGGAGATCAATGGTACTGGGAATCTGACCTTAATACTACTATAAGAAAGCTCTTCAATAGAGGTTTCCAAGGAAGACTATTGGTTTCATAG 3882 0.3735 MDALSSIASNVALPLLRQFTYVLMYNSYLIELETEIQKLQREEKEMKHSVEAAKRNGEEIEDTIRDWFSRVQASIEEAQTFLRGEDKERVGCLDVYSRYTNSQRAKSLVDILCEIRKETFDRISYRCALKCNFSSSARGYVDLESRTTMLNEILNVLKVDSTVHMIGVYGMAGVGKTALVKELAWKAEKDGIFDVVVVANVTNSPNMGTIRAEIADGLGLKFDELTEVGRASRLRQRIRQEMKILVILDDIWGKLSLTEVGVPFGDDHEGCKVLVTSRDLSVLTTDLGAKKVYRLEVLSDDESWKLFEKRGENAVKDLSIQPVAMKVAKNCAGLPLLIVNLVEALKNKDLYAWKDALEQLTNFDFDGCFYSKVYSAIELSYDYLESQELKTFFLLLGSMGNGYNIKDLLVYGWCLGLHKHVDTLADGRNRLHKLIDNLRDACFLLEGERDSVEALEVVRVVAASIASKLKPLFAVERNAKLKEWPRKDFLKNCHHIFLDWCLIDELPERLDCPNLKILKLHSQGNHLKVHDNFFDQMKELKVLSLGGVNCTPSLPSSLALLTNLQALALCKCVLEDISIVGEITSLEILNLEKSDLRVIPPEIQKLINLRLLNLTDCSTLEIVPRNLLSSLTSLEELYMGISNVQWEVKVKEIEDLNKISILSELKNLHQLSTLNMHINDASLFPRDMLSFGRLESYKILIGQGWKFSEEESENYKSSRILKLNLSTDPRILMDYGIKMLMNRAEDLYLAELKGVKEVLYELNDEGFSRLKHLNIQSCEELESIIGSTIWSHHDHAFPNLESLILHNVMKLERICSEPLPAQAFAKLQIVKVKNCDMMEFVFLHSMVQHLSELVEIEISECRIMNYIIAKQRQEDEGETDKIALPKLRSLTLESLPSLVSLSPESCIKDSENNNDFSSQLLSDKVEFPCLETLKLHSINVQRIWDDQLSAHSCFENLTKLTVDGCEKLKYLVSYSVAERLVKLEHLSISSCKLVEEIFVPDEIMSRIAHVHDEIMSHIPHIRKSSHVEMVPIFPNLETLVISNMDNLKSIWPNQLTQNSFCKLKKMEITSCDQLLNVFPSHVLNKLQSMESLSISNCVALEVVYEIDAIREEEELEISLRTLSLGNLPNLKYLWNKDPQGNIKYQNLFMVKVTKCESLKHMFPFSVAKDLLQLQVLEISDCGVEEIIAKDQGDDKKEHVGLVFTRLVSLKFLNLQELRCFCSGNHNFRFPMLNKLYVVECPKMETFSHGILRASILRRICLNQNGDQWYWESDLNTTIRKLFNRGFQGRLLVS 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00291 1293 CDD AAA 149 277 - -
Trre5g00291 1293 SMART AAA_5 162 298 IPR003593 GO:0016887
Trre5g00291 1293 Gene3D Ribonuclease Inhibitor 657 878 IPR032675 -
Trre5g00291 1293 Gene3D Ribonuclease Inhibitor 1009 1281 IPR032675 -
Trre5g00291 1293 Gene3D - 123 291 IPR027417 -
Trre5g00291 1293 Gene3D Ribonuclease Inhibitor 462 656 IPR032675 -
Trre5g00291 1293 SUPERFAMILY L domain-like 913 1265 - -
Trre5g00291 1293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 395 IPR027417 -
Trre5g00291 1293 Pfam NB-ARC domain 147 382 IPR002182 GO:0043531
Trre5g00291 1293 PRINTS Disease resistance protein signature 238 252 - -
Trre5g00291 1293 PRINTS Disease resistance protein signature 165 180 - -
Trre5g00291 1293 PRINTS Disease resistance protein signature 604 620 - -
Trre5g00291 1293 PRINTS Disease resistance protein signature 331 345 - -
Trre5g00291 1293 Coils Coil 22 56 - -
Trre5g00291 1293 Gene3D - 297 385 IPR042197 -
Trre5g00291 1293 Gene3D Ribonuclease Inhibitor 879 1008 IPR032675 -
Trre5g00291 1293 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1117 1254 - -
Trre5g00291 1293 SUPERFAMILY L domain-like 489 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00291 Trre-Chr5 1789448 1794013 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00291 163 438 WRKY Transcription Factor Family AT5G45050 25.597 1.85e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00291 - - gmx:100814903 1776.14