Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00284 ATGAAACGGAGAAATTCTAATGATCGAAAGATGAAAGCAAAAGTCAATAAAGATGACTTCACCCGCGAAGAACGTGAAATATGTAAAACTTTTCTTTTATTGGGAACGCCATTCATAATGAAGGAGACTCCAGAACTGGAAATAACTCTTGGCAGCAAACCGATTCATGAAACAATCGATAACAACAATGTTGATTTAATGCCACAGCAAATCAATATCCCCAACGATGTTACGGATAATAAATACTACTCTCCATATATACCAACGATTCCCGGCGTTCCAAACAATAATATTGTTGATTGTTGCAAGCCTTTGGAGAAGAAACTATATCCTAGTGATTTAAATGAGAATCTCAATAGATTGATGATGAACACTAAACATGTGATAGAATATTTCTTGCCCTTGTTGAGAGAAGGAGAAAAAGCCGAAGATGGAATAAATGGTGTTGCCTATGACATGCAAGGCAAAACGTTCAATATGACGTTCAAGTATTGGAAAAGTGGAAGATATTATATCCTTAATGGAGAGTGGAAGACTTTCTTCAAAACACATAACTTGAAAGCAAATCGAGATCATTATATTACAGTTTGGATGTTTCGTCATTCAGAAACTAATAGCTTATGTTTTGCTCTTAGTGTCAGAACTGAACAAATAAAAAAGGAGGATGTGATTAGAGGGAAGAAAAAAGGGAAGTCATACAATGTTGGAAACTTGGGTGCAAATTACATGAAAGGAACAAGAACTATTAATTTGAGAGTAGCAGATGGTGAAGGGACATCACGTCCAGCAGAGTTGACGCATGAAATGCATGAATTGATACAGGAAATGGCGCAAGATAAGGCTCTTATGCAACATGTTCTTCCAAGACAACAAACCTTAGATGACAAGTTGGAGCATGAACCCACTGCAGACCCCAATATTGATGATCCATATGAATTAGTTTTTGGTAAAGAGGAGGAAGAGAAAGAGAAAGATGAGAATTTTGATGATGAGTGA 996 0.3645 MKRRNSNDRKMKAKVNKDDFTREEREICKTFLLLGTPFIMKETPELEITLGSKPIHETIDNNNVDLMPQQINIPNDVTDNKYYSPYIPTIPGVPNNNIVDCCKPLEKKLYPSDLNENLNRLMMNTKHVIEYFLPLLREGEKAEDGINGVAYDMQGKTFNMTFKYWKSGRYYILNGEWKTFFKTHNLKANRDHYITVWMFRHSETNSLCFALSVRTEQIKKEDVIRGKKKGKSYNVGNLGANYMKGTRTINLRVADGEGTSRPAELTHEMHELIQEMAQDKALMQHVLPRQQTLDDKLEHEPTADPNIDDPYELVFGKEEEEKEKDENFDDE 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00284 331 CDD B3_DNA 107 214 IPR003340 GO:0003677
Trre5g00284 331 MobiDBLite consensus disorder prediction 292 331 - -
Trre5g00284 331 SUPERFAMILY DNA-binding pseudobarrel domain 106 209 IPR015300 -
Trre5g00284 331 Gene3D - 105 229 IPR015300 -
Trre5g00284 331 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 99 214 IPR005508 GO:0003677
Trre5g00284 331 MobiDBLite consensus disorder prediction 292 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00284 Trre-Chr5 1760053 1761962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00284 103 211 B3 DNA Binding Superfamily AT4G03170 36.697 4.03e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00284 - - tpra:123915381 212.231