Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00264 ATGGTGGACAAATTTTTGAGTTTGGCACTACCAATTGGGAGCAACAAGGACCACCCCTTCACATGTCCAATGGGCACGGCCGCGCCACCCCTTGACGGCCTAAAATTGCCGCCATTTCTTCTATGCATAGCTGAGAAAGACATGATGAAGGATACAGAAATTGAGTACTATGAAGCCATGAAGAAGGCCAATAAAGAAATAGACTTGTTTGTGAGCAAGGGAATGCCACATGGTTTCTATCTCAACAAGATTGCTATGGATACGGACTCCACTGTTAGTGCTCAAATGGATGCACTCATTGGGAGGGTCAAGGAATTCATTGAGAAGTATTAA 333 0.4444 MVDKFLSLALPIGSNKDHPFTCPMGTAAPPLDGLKLPPFLLCIAEKDMMKDTEIEYYEAMKKANKEIDLFVSKGMPHGFYLNKIAMDTDSTVSAQMDALIGRVKEFIEKY 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00264 110 Pfam alpha/beta hydrolase fold 2 80 IPR013094 GO:0016787
Trre5g00264 110 Gene3D alpha/beta hydrolase 1 108 IPR029058 -
Trre5g00264 110 SUPERFAMILY alpha/beta-Hydrolases 2 109 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00264 Trre-Chr5 1598852 1599184 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00264 3 107 Carbohydrate Esterase AT5G16080 29.524 3.52e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00264 - - gmx:100806530 181.8