Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00263 ATGATGCTAGAGAAGAAGCTGGTGGATGAAGTCTCCGGTTGGCTTAGAATCTATGACGATGGTTCGGTAGACCGGACATGGACTGGACCACATGAGGCCAAATTCATGATTGAATCAGTTCCTCCACATGAACAATTCATAGAAGGAGTTGCCACTCGTGATGTGACAACCGCCACTTTCATCGCCAATGACGGTTTCATTCCTCACGCCCGGTTATACCTACCGGAAAAAACAACTAAGGACAATAAAAAATTGCCCATAGTCATACACTTTCACGGTGGCGGTTTTTGTATTACAGAACCAAATTCTTTTATGTACTACAATGTATACACCAAATTTGTTCGTTGTACTCGGTCTATTTGTGTCTCTCCCTTCCTCAGACGAGCACCAGAGCATCGTCTTCCTACTGCCATTGACGACGGGCTTGCAACGCTCCAGTGGCTTCAATCAGTTGCCAAGGGAGATGTCTTTGACCCGTGGCTTGAGGAATACAGTGACTTCAACAAAGTTTTCCTCATTGGAGATAGCTCGGGAGGAAACTTAGTCCATGAAGTAGCAGCTAGAGTGCGTTCGGCCGACCTGAGTCCTGTTCGACTCGTCGGAGCAATTCCAATCCATCCTGGGTTTGTCAGGTCAACTCGAAGCCGATCCGAAATTGAAATGCCATAA 669 0.4664 MMLEKKLVDEVSGWLRIYDDGSVDRTWTGPHEAKFMIESVPPHEQFIEGVATRDVTTATFIANDGFIPHARLYLPEKTTKDNKKLPIVIHFHGGGFCITEPNSFMYYNVYTKFVRCTRSICVSPFLRRAPEHRLPTAIDDGLATLQWLQSVAKGDVFDPWLEEYSDFNKVFLIGDSSGGNLVHEVAARVRSADLSPVRLVGAIPIHPGFVRSTRSRSEIEMP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00263 222 SUPERFAMILY alpha/beta-Hydrolases 4 221 IPR029058 -
Trre5g00263 222 PANTHER ARYLACETAMIDE DEACETYLASE 9 219 - -
Trre5g00263 222 Pfam alpha/beta hydrolase fold 88 213 IPR013094 GO:0016787
Trre5g00263 222 Gene3D alpha/beta hydrolase 6 222 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00263 Trre-Chr5 1598162 1598830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00263 7 218 Carbohydrate Esterase AT1G68620 34.742 1.08e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00263 - - lja:Lj0g3v0229819.1 343.199