Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00262 ATGATGCTAGAGAAGAAGCTGGTGGATGAAGTCTCCGGTTGGCTTAGAATCTATGACGATGGTTCGGTAGACCGGACATGGACTGGACCACATGAGGCCAAATTCATGATTGAATCAGTTCCTCCACATGAACAATTCATAGAAGGAGTTGCCACTCGTGATGTGACAACCGCCACTTTCATCGCCAATGACGGTTTCATTCCTCACGCCCGGTTATACCTACCGGAAAAAACAACTAAGGACAATAAAAAATTGCCCATAGTCATACACTTTCACGGTGGCGGTTTTTGTATTACAGAACCAAATTCTTTTATGTACTACAATGTATACACCAAATTTGTTCGTTGTACTCGGTCTATTTGTGTCTCTCCCTTCCTCAGACGAGCACCAGAGCATCGTCTTCCTACTGCCATTGACGACGGGCTTGCAACGCTCCAGTGGCTTCAATCAGTTGCCAAGGGAGATGTCTTTGACCCGTGGCTTGAGGAATACAGTGACTTCAACAAAGTTTTCCTCATTGGAGATAGCTCGGGAGGAAACTTAGTCCATGAAGTAGCAGCTAGAGTGCGTTCGGCCGACCTGAGTCCTGTTCGACTCGTCGGAGCAATTCCAATCCATCCTGGGTTTTTTGGCACTACCAATTGGGAGCAACAAGGACCACCCCTTCACATGTCCAATGGGCACGGCCGCGCCACCCCTTGA 702 0.4801 MMLEKKLVDEVSGWLRIYDDGSVDRTWTGPHEAKFMIESVPPHEQFIEGVATRDVTTATFIANDGFIPHARLYLPEKTTKDNKKLPIVIHFHGGGFCITEPNSFMYYNVYTKFVRCTRSICVSPFLRRAPEHRLPTAIDDGLATLQWLQSVAKGDVFDPWLEEYSDFNKVFLIGDSSGGNLVHEVAARVRSADLSPVRLVGAIPIHPGFFGTTNWEQQGPPLHMSNGHGRATP 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00262 233 Gene3D alpha/beta hydrolase 6 230 IPR029058 -
Trre5g00262 233 Pfam alpha/beta hydrolase fold 88 212 IPR013094 GO:0016787
Trre5g00262 233 PANTHER ARYLACETAMIDE DEACETYLASE 9 213 - -
Trre5g00262 233 SUPERFAMILY alpha/beta-Hydrolases 4 220 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00262 Trre-Chr5 1598162 1598946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00262 3 213 Carbohydrate Esterase AT3G48690 34.101 1.40e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00262 - - lja:Lj0g3v0229819.1 324.709