Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00260 ATGGCGCAAGATAATAAAAAGCTGGTGGATGAAGTGTCCGGTTGGCTTAGAGTCTATGATGATGGTTCGGTGGACCGGACATGGACCGGACCACCCGAGGTCAAATTCATGATTGAACCGGTTGCTCCTCATGAACAATTTATCGAAGGAGTTGCCACTCGTGACGTGACAACCTCCATGACTACTACTAATGATGGTTCCATCCATCGCGCTCGGTTGTATCTACCGGAGAAAACACCCAAGGACAATATAAAATTGCCCATACTTATGCACTTCCATGGTGGCGGTTTTTGCATTACCGAACCAGATTCGTTCATGTACTACAATGTGTATACCCAATTCGTCCGATGTACTTGTTCTATTTGTGTCTCTCCTTTCCTCCGACGAGCACCAGAGCACCGTCTTCCTGCTGCCATTGATGACGGGTTTGTAGCACTCAAGTGGCTTCAATCAGTTGCAAGGGGAGATGCGCGTGACACATGGCTTGAGGAATATGGTGACTTCGACAAAGTTTTCCTCATAGGAGATAGCTCGGGAGGAAATTTAGTCCATGAAGTAGCAGCTAGAGCCGGTTCGGACGACTTGAGCCCAATTCGACTTGCAGGAGCAATTCCAATTCATCCTGGGTTTGTCAGATCAATCCGAAGCCAGTCTGAAATTGAAATGCCACAATCACCATTTCTAACATTGGAAATGGTGGACAAATTTTTGAGTTTGGCACTACCAATTGGAAGCAGCAAGGACCACCCCTTCACATGTCCGATGGGCACGGCTGCGCCACCCATTGACGGCCTAAAACTGCCGCCATTTCTTTTATGTGTAGCTGAAAAAGACTTGATGAGAGATACAGAAATGGAGTACTATGAAGCCATGAAGAAGGCAAATAAAGAAGTGGACTTGTTTGTGAGCAAGGGAATGACACATTGTTTCTATCTCAACAAGATTGCTGTGGATCTGGACTCCACCGTTAGATCCCAGATGGATGCACTCATTGGGAGGGTAAAGGAATTCATTGAGAAGCATTAA 1026 0.463 MAQDNKKLVDEVSGWLRVYDDGSVDRTWTGPPEVKFMIEPVAPHEQFIEGVATRDVTTSMTTTNDGSIHRARLYLPEKTPKDNIKLPILMHFHGGGFCITEPDSFMYYNVYTQFVRCTCSICVSPFLRRAPEHRLPAAIDDGFVALKWLQSVARGDARDTWLEEYGDFDKVFLIGDSSGGNLVHEVAARAGSDDLSPIRLAGAIPIHPGFVRSIRSQSEIEMPQSPFLTLEMVDKFLSLALPIGSSKDHPFTCPMGTAAPPIDGLKLPPFLLCVAEKDLMRDTEMEYYEAMKKANKEVDLFVSKGMTHCFYLNKIAVDLDSTVRSQMDALIGRVKEFIEKH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00260 341 Gene3D alpha/beta hydrolase 7 339 IPR029058 -
Trre5g00260 341 Pfam alpha/beta hydrolase fold 89 311 IPR013094 GO:0016787
Trre5g00260 341 SUPERFAMILY alpha/beta-Hydrolases 8 340 IPR029058 -
Trre5g00260 341 PANTHER ARYLACETAMIDE DEACETYLASE 10 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00260 Trre-Chr5 1591773 1592798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00260 8 339 Carbohydrate Esterase AT5G16080 32.941 4.58e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00260 - - lja:Lj0g3v0229819.1 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g00260 5 1591773 1592798 Trre5g00260 5 1591773 1592798 ECH