Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00259 ATGGTGCAAGAGAAGAAGGTGGTGGATGAAGTGTCCGGTTGGCTTAGAATCTATGACGATGGTTCGGTAGACCGGACATGGATGGGACCACCTGAGGTCGAATTCATGATTGAACCGGTAGCTTCCCATGAACAATTCATTGAAGGAGTTGCCATTCGTGATGTGACAACCGCCTTGACCAACATCAATGACGGTTCCATCCATTGCGCTCGGTTATACCTGCCGGAAAAAACACCTAAGGACAACCAAAAACTACCTATACTCATCCATTTCCACGGTGGTGGTTTCTGCATTAGCGAACCAAATTGGTTCATGTACTATCATGTGTACACCCAATTCGTCCACGACACTCGATCTATTTGTGTGTCTCCGTTCCTCCGACGAGCACCAGAACACCGTCTTCCTGCTGCCATTGAGGACGGGTTTGCAACTCTCCAGTGGCTCCAATCAGTTGCCAAGGGAGACGCTCGTGACCCATGGCTTGAGGAACACGGGGACTTCAACAAAATTTTCCTCATTGGAGATAGCTCTGGAGGAAACTTAGTCCACGAAGTAGCAGCTAGAGCAAGTTCGGTCGACCTGAGTCCAATTCGGCTTGCTGGAGCAATTCCAATCCATCCTGGGTTTGTTAGGTCAGAACGAAGTCGATCTGAAACTGAAATGCCACAATCACCATTTCTGACATTAGACATGCTGGACAAATTTGTGAGTTTGGCGCTACCAATTGGGAGCAACAAGGATCACCCCTTCACATGTCCGATGGGCGCAGCCGCGCCACCCCTTGACAGCCTAAAATTGCCGCCATTTCTTCTATGTCTAGCTGAAAAAGACTTGTTGTGGGATACAGAAATGGAGTACTATGAAGCAATGAAAAAGGCCAATAAAGAAGTGGAGTTGTTTGTGAGCAAGGCAATGACGCATAGTTTCTATCTCAACAAGATTGCCGTAGATATGGACCCTACTGTTAGATCTCAAATGGATGCACTCATTGGTAGGGTTAAGGAATTCATTGAGAATCATTAA 1023 0.4702 MVQEKKVVDEVSGWLRIYDDGSVDRTWMGPPEVEFMIEPVASHEQFIEGVAIRDVTTALTNINDGSIHCARLYLPEKTPKDNQKLPILIHFHGGGFCISEPNWFMYYHVYTQFVHDTRSICVSPFLRRAPEHRLPAAIEDGFATLQWLQSVAKGDARDPWLEEHGDFNKIFLIGDSSGGNLVHEVAARASSVDLSPIRLAGAIPIHPGFVRSERSRSETEMPQSPFLTLDMLDKFVSLALPIGSNKDHPFTCPMGAAAPPLDSLKLPPFLLCLAEKDLLWDTEMEYYEAMKKANKEVELFVSKAMTHSFYLNKIAVDMDPTVRSQMDALIGRVKEFIENH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00259 340 SUPERFAMILY alpha/beta-Hydrolases 5 339 IPR029058 -
Trre5g00259 340 Pfam alpha/beta hydrolase fold 88 310 IPR013094 GO:0016787
Trre5g00259 340 Gene3D alpha/beta hydrolase 5 338 IPR029058 -
Trre5g00259 340 PANTHER ARYLACETAMIDE DEACETYLASE 9 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00259 Trre-Chr5 1582302 1583324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00259 7 330 Carbohydrate Esterase AT1G68620 34.441 7.10e-52 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00259 - - lja:Lj0g3v0229819.1 554.673