Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00256 ATGATTAGTGAGAAAATGAATGATTCAGCAGCATGTTTCACAGATTCATCTTCATTTTCAGTTCCAAATACTTTCATTGGTCTTCTTCTACTTAACATCAAAATCAGATCTTCTTCTTCATGTAACAACAACAACAACAACACTCTTCTCTTTACACCTTCTCAGCTTCTTAGAGATTTTGCCATAAGAGAATTCAATGCTTTTCTTTGGGTTTTTCTTCTTTTTATCACTACCCTTTTGGTTAAAAGACTCTTTGATATCTTTACTTTGTTGTATAAAGCTAAAAAAATACCTGGACCTCCATCTTCATCATTTTTTGGACACTACAAACTCCTCTCCAAACAAAATTTCAATGATGTGTTGTCAGAATCCCATGAGAAGTATGGTCCAATTGTTAAGCTATGGTTAGGCCCTACTAAGCTTCTGGTGTCAGTTAAGGATCCAGTGCTGATTCAAGAGATGCTTATACAGGCTGAGGATAAATTACCTTTTACTGGAAAAGTCTTTCATCTTGCCTTTGGGGAATCAAGCCTTTTTGCTCCTTCCTATGAAAAGGTCCAAAAGAGAAGGGAGTTATTGGCAACAGAATTGAATGAAAGATTAATGACGACTGCTGATCTGAATCCTCTGAAAGTTGCAGACTTTATTATAGATCAAATAGATAACATCAAAGGCAGAGGAAGCATTGGTTGCGAGTTGGTTTCTCAGCATATGGCTTTCACATTAATGGGGGCGACATTCTTTGGAGATGGCTTCTTGGCTTGGCCGAAGGCTGCAGTATACGAGGAACTTCTAATGATGATTGCTAATGTTGCTTGCTTTTGGGCTTCCTATAATGTTACTCCATTTTGGAAACAAGGATTTTGGAGGTACCAACACTTATGCACACAGTTAAGATGCTTAACTCAAGACATTCTTCAAAATTGCAGAAAGAGCTGCATTCATAGCGAGAGTTCCAAGCCGGAAATGAAATCAGCAGATAGTGCACAATACATCTCTAATGACAGTTTCCAAAATTACCATTTCTTTCGTGACCATAATGATCAGCAAAATTCTAAGGAAGAACCTTACGGGAACATCATGCGTGTGATGCTTCATGGATGCCAAACTACAGGTTCTTTGATTGCCAATGTATTGACTAATCTTGCCGTGCATCTGGAAATTCAGGACAAGGTTTATTCAGAGATTAGCATGGTTGGGAAAAACCCATCAAAATATGAGCATGAAGAAGTTTATAGGATGCCATTGTTGTTGGCTACAATTTATGAATCTGCACGCATTCTCCCCACCAGTGCCATGTTGCAGAGGTGTTCTACAAAACACGACGTGAGATTTGCAACTGGTGTAACCATACCTGCTGGATCTGTAATGGTTGTGCCTCTTCAATTGGTACAGAAGGATGGCTTCAATTGGGGGAAAGATGCAAGTGATTTTAATCCATACAGATTTCTCTCAAACATTACAAAAGGAACAGGTTCTGAAGACCAACTTGATTATGGAATCAGCTCGTTTGTACTAAACGATCCAAGTGAAAATGCAGCATTTCTTCCTTTTGGATCCGGCGCACGTGCATGCGTTGGGCAGAAATTTGTTATCCAAGTTGTAGCCACATTGCTGGCATCATTACTCAAGAAATATGAGATAAGGCTCAATACAGGCACCGGCTCAGATGGTGACTCTGAACAAATCTTGAAAAATCATCTTCTCCAGCATCATCCTAATTCACAAATACTGTTTGTGAGAAGAGACCAGTGA 1755 0.3915 MISEKMNDSAACFTDSSSFSVPNTFIGLLLLNIKIRSSSSCNNNNNNTLLFTPSQLLRDFAIREFNAFLWVFLLFITTLLVKRLFDIFTLLYKAKKIPGPPSSSFFGHYKLLSKQNFNDVLSESHEKYGPIVKLWLGPTKLLVSVKDPVLIQEMLIQAEDKLPFTGKVFHLAFGESSLFAPSYEKVQKRRELLATELNERLMTTADLNPLKVADFIIDQIDNIKGRGSIGCELVSQHMAFTLMGATFFGDGFLAWPKAAVYEELLMMIANVACFWASYNVTPFWKQGFWRYQHLCTQLRCLTQDILQNCRKSCIHSESSKPEMKSADSAQYISNDSFQNYHFFRDHNDQQNSKEEPYGNIMRVMLHGCQTTGSLIANVLTNLAVHLEIQDKVYSEISMVGKNPSKYEHEEVYRMPLLLATIYESARILPTSAMLQRCSTKHDVRFATGVTIPAGSVMVVPLQLVQKDGFNWGKDASDFNPYRFLSNITKGTGSEDQLDYGISSFVLNDPSENAAFLPFGSGARACVGQKFVIQVVATLLASLLKKYEIRLNTGTGSDGDSEQILKNHLLQHHPNSQILFVRRDQ 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00256 584 Pfam Cytochrome P450 98 558 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00256 584 SUPERFAMILY Cytochrome P450 94 582 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00256 584 PRINTS E-class P450 group I signature 525 548 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00256 584 PRINTS E-class P450 group I signature 515 525 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00256 584 PRINTS E-class P450 group I signature 375 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00256 584 PRINTS E-class P450 group I signature 125 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00256 584 CDD cytochrome_P450 129 550 - -
Trre5g00256 584 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 518 527 IPR017972 GO:0005506|GO:0016705
Trre5g00256 584 Gene3D Cytochrome P450 93 576 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00256 584 PANTHER CYTOCHROME P450 FAMILY 4 67 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00256 Trre-Chr5 1551473 1556390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00256 367 551 Cytochrome P450 AT3G14620 28.495 6.05e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00256 - - psat:127085922 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g00256 5 1551473 1556390 Trre5g00256 5 1551473 1556390 ECH