Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00234 ATGCTTCTACCTTTTAAGAGTTTGTATTTTGGCTCAGTTGCATCATCTTCTGCTTTACATTCCTATCCCCTGGCAACACAGCGACATAAAGCTCTCTCGATTACAGATCAGACCCTTCTAAGCACAAGTCTCAATTTAAGTGAAACTAATCATTTTAGAGGCCAATCTCTAGATCTTGGGAGAAAGAATGCTGATACAAGTTCTTCTAAAAACTCATATATTGATCATGCTCTAAGCCAGGCCTCTAGTGGCGGAAGCATTTCAGATACTGAGTCTTCCATTTACGGTCAAAACTATGCGAAGTATGTGCCACAAGGTACTAAACTTCCAACACCAAATAGGCAGGAAAACTATAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCACAAGGAATGCATGCAGTAGCTCAAACTGAGAACATTGGTGCATCACAAAAGCTGAATGAACTAACCAAGAGAAGATCAGAAGAATCCATGAAAATGAAGGAGATTGTTGCTAACGAGGAGATGGCCGAGGAATTAGCAAATCAATAA 543 0.3978 MLLPFKSLYFGSVASSSALHSYPLATQRHKALSITDQTLLSTSLNLSETNHFRGQSLDLGRKNADTSSSKNSYIDHALSQASSGGSISDTESSIYGQNYAKYVPQGTKLPTPNRQENYNLELEKLRIELRHAQGMHAVAQTENIGASQKLNELTKRRSEESMKMKEIVANEEMAEELANQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00234 180 Coils Coil 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00234 Trre-Chr5 1435547 1436940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00234 113 180 U-box Gene Family AT5G61550 52.941 2.93e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00234 - - gsj:114409387 192.971