Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00198 ATGGCAGAAACTGCAGTATTATTTGCTCTCAGGGAAGTGTTCCAATTCCTAAAAGAAGAAACAAATATTCTGAGAGGTCTCCACAGAGATTTTTCAGACATCAAAGATGAACTAGAAAGCATTCAAATCTTCCTCAAAGATGCCGACAGAAGGGCAGCAGATGAAGCAGACACCAATGATGGAATAAGAACTTGGGTCAAGCAGCTGAGAGAAGTATCATTTCGCATTGAAGATGTCGTTGATGAATATCTTCGGATGAGGCATGGCGTCAAACCTACTGGATGTGTAGCATTAGCCTGTAGTAAGATTGCAAGCCTAATCAAAACTTTGATTCCCCGTCATCAGATAGCATCTGAGATTCAAGATATTAAGTTGTCAATTCGTGGAATCAAGGAAAGAAGCGAAAGATATAACTTTCAATTTTTACATGAACCAGGATCATCAAGCACGAGAGAGACAGAAAATGGAGGATGGCGCGATCCTCGATTGGCTGCCCTTTTCATTGAAGAAACTGAAGTTGTAGGATTCGAAGGCCCGAGAGAGGAATTGTTTGGTTGGTTATTGGAGGGTGCAGCTGAGCGCACTGTGATTTCAGTGGTAGGAATGGGAGGTATAGGAAAAACCACCCTCGCCAAACTAGTTTTTGACAGCCAAAAGGTAACAACACAATTTGATTGTCGCGCTTGCATCGCAGTTTCTCAATCATACACTGTGAGAGGGTTATTGATAAACATAATGGAGCAATTTTGTCGCGAAACTCAAGACCCGCTTCCGCAAATGTTGCACAAAATGGATGACAAGTCACTGATAATTGAAGTGAGGCAATACCTGCAAAATAAGAGGTATTTGATATTCTTTGATGACGTATGGCAAGAAGATTTTTCTGACCAGGTTGAGTTTGCCATGCCTAATAACACTAAAGGTAGTAGGATCATAATCACAACTAGAATGATGCATGTTGCAGAATTTTTCAAAAAATCCTTTCTAGTCCATGTTCACAAGCTGCAACTTTTGCCTCCAAACAAAGCATGGGAACTCTTCTGCACAAAAGTATTTAGATTTGAACTTGGTGGGAAATGTCCACCGGAGCTTGAGGTTGTATCAAAACAAATTGTTAAAAACTGCAAGCAGCTACCGCTGGCAATTGTTGCCATTGGTGGTCTACTTTCAACAAAATCTAAAACGATGATTGAATGGAAAAAGGTTAGTCAAAACTTGAGCCTGGAGTTGGGACGTAATGCCCATTTAACGAGTCTAACCAAGATTTTGTCTCTTAGTTATGATGGCCTTCCTTACTACTTGAAACCATGCATTTTTTATTTTGGTATATATCCAGAGGACTATTCTATTAATCATAAGAGATTAACTCGACAATGGATAGCTGAAGGGTTTGTTAAATCTGATGAGAGACAAACTCCAGAGCAAGTTGCAGAGGACTACTTGTCGGAATTGATTCACCGAAGTCTGGTTCAGGTCTCAAAAGTTGGCTTTGAAGGGAAAGTTAAAACATGTCAAGTCCATGATTTATTTCGGGAAGTGATCGTTAGGAAAATGAAGGATTTAGGTTTCTGTCATTGTGTGCATGAAGATAGTGAATCAATGGCGGTTGGAAAAACTAGACGCCTATCTATAGCCACTAATCCCAACAATGTGTTGAAGAGCACTAACAATTCACATTTTCGAGCTATTCATGTTTTTGAAAAAGATGTATCATTGGAGCATTTGATGGGTAGACTGTGTTCACAGTCTAGGATTTTGAAGGTACTTGACATTCAAGGTACATCATTGAATATTATTCCTAAAAATTTGGGGAGTCTTTTCCACTTAAGGTACTTAAACTTAAGTCATACAAATGTACAGTCCCTTCCTAAATCTGTTGGTGAGCTACAGAACTTAGAAACATTAGATTTAAGAGAAACACTTGTGCATGATCTACCACGCGAAATAAACAAGTTGGGAAAGCTACGACATCTTCTTGCCCTCCACCGTAACCATGAAGGAAAGTATTCTCTTTTAGGCTTTACAACTGGTGTGCGGATGGAACAAGGTATTAAAAACTTGACTTCCCTACAAAATCTTTATTATGTGGAAGTAGATCATGGGGGGATAGATCTCATTCAAGAGATGAAAATGTTACGACAATTAAGGCGGTTAGGTTTAAGGCGTTTAAGAAGAGAACATGGAAATGCCTTATGTGCTGCAGTTGTAGAAATGAAACACCTTGAGAATCTGAATATCACTACAACAGATGAGGATGAAACAATAAACTTGAACTCTATCTCATTTCCACCCCAACTTCAGCGGCTTCATTTGAAAGCTAAACTAGATACATTGCCTGATTGGATTCCAAAACTTGAGTATCTTGTTGAGATAAAGCTGGCTTTATCTAAGTTGAAAGAGGATCCGCTAATGTCACTGAAAAATTTGCCAAATCTGCTGAAGCTCGCTCTGTGGGACAATGCCTACGATGGTGAAATTTTGCATTTTCAAAATGGAGGGTTTCTGAAATTGAAGAAACTGAATCTCAGTCGCTTGAATAGAGTAAATTCCATCGTTATAGAGAAAGGAGCTTTGCTCTCTCTTGATAATATTATAATGGACAAAATCCCCGGAGTGAAGGAAGTACCCTTTGGCATCAAGCACTTGGACAACCTCAAAGATATTATATTCACTGATATGCCAGCTGAATTTACCGAGAGCATTGATCGAGACAAAGGAGAATACTACTGGATTATCAAGCATGTACCTTTTGTATTCATTCGCCACTGGATTGGCCCAAACTTACTTGATTTTGATATTCGTACGATTCACTCATCCTCCAAGGAGTCACAAACAAATTGA 2841 0.3921 MAETAVLFALREVFQFLKEETNILRGLHRDFSDIKDELESIQIFLKDADRRAADEADTNDGIRTWVKQLREVSFRIEDVVDEYLRMRHGVKPTGCVALACSKIASLIKTLIPRHQIASEIQDIKLSIRGIKERSERYNFQFLHEPGSSSTRETENGGWRDPRLAALFIEETEVVGFEGPREELFGWLLEGAAERTVISVVGMGGIGKTTLAKLVFDSQKVTTQFDCRACIAVSQSYTVRGLLINIMEQFCRETQDPLPQMLHKMDDKSLIIEVRQYLQNKRYLIFFDDVWQEDFSDQVEFAMPNNTKGSRIIITTRMMHVAEFFKKSFLVHVHKLQLLPPNKAWELFCTKVFRFELGGKCPPELEVVSKQIVKNCKQLPLAIVAIGGLLSTKSKTMIEWKKVSQNLSLELGRNAHLTSLTKILSLSYDGLPYYLKPCIFYFGIYPEDYSINHKRLTRQWIAEGFVKSDERQTPEQVAEDYLSELIHRSLVQVSKVGFEGKVKTCQVHDLFREVIVRKMKDLGFCHCVHEDSESMAVGKTRRLSIATNPNNVLKSTNNSHFRAIHVFEKDVSLEHLMGRLCSQSRILKVLDIQGTSLNIIPKNLGSLFHLRYLNLSHTNVQSLPKSVGELQNLETLDLRETLVHDLPREINKLGKLRHLLALHRNHEGKYSLLGFTTGVRMEQGIKNLTSLQNLYYVEVDHGGIDLIQEMKMLRQLRRLGLRRLRREHGNALCAAVVEMKHLENLNITTTDEDETINLNSISFPPQLQRLHLKAKLDTLPDWIPKLEYLVEIKLALSKLKEDPLMSLKNLPNLLKLALWDNAYDGEILHFQNGGFLKLKKLNLSRLNRVNSIVIEKGALLSLDNIIMDKIPGVKEVPFGIKHLDNLKDIIFTDMPAEFTESIDRDKGEYYWIIKHVPFVFIRHWIGPNLLDFDIRTIHSSSKESQTN 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00198 946 Gene3D - 164 330 IPR027417 -
Trre5g00198 946 Gene3D - 338 426 IPR042197 -
Trre5g00198 946 SUPERFAMILY L domain-like 507 898 - -
Trre5g00198 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 440 IPR027417 -
Trre5g00198 946 CDD RX-CC_like 2 132 IPR038005 -
Trre5g00198 946 Gene3D Ribonuclease Inhibitor 549 902 IPR032675 -
Trre5g00198 946 Gene3D - 4 117 - -
Trre5g00198 946 FunFam Probable disease resistance protein At1g61300 161 327 - -
Trre5g00198 946 Pfam Rx N-terminal domain 5 85 IPR041118 -
Trre5g00198 946 Pfam NB-ARC domain 181 428 IPR002182 GO:0043531
Trre5g00198 946 PANTHER DISEASE RESISTANCE PROTEIN RP 33 858 IPR044974 GO:0006952
Trre5g00198 946 PRINTS Disease resistance protein signature 276 290 - -
Trre5g00198 946 PRINTS Disease resistance protein signature 375 389 - -
Trre5g00198 946 PRINTS Disease resistance protein signature 627 643 - -
Trre5g00198 946 PRINTS Disease resistance protein signature 196 211 - -
Trre5g00198 946 Gene3D - 427 518 IPR036388 -
Trre5g00198 946 FunFam Probable disease resistance protein At1g63360 427 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00198 Trre-Chr5 1212965 1215805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00198 196 394 WRKY Transcription Factor Family AT5G45050 27.670 1.41e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00198 K13457 - tpra:123915389 1614.36