Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00154 ATGGATAGTGAAAGGAACATAGAAATCTCTAGTAACAACCTCAAAATCAAGATTGCAACAAGTAGTAGCAAAAAACAAGGTGAAGAGAGTTTAGATAATATTTCAAATTTACCTTCACCAAATATAAAATCTTCCATAGAGTCATCACCTTATGAATCACCTCTTGTTTCTCCACCTTCATCAGCATTTGTTTCAGCATTACAATCTCCATATATATCTCCAAGAGCCACACTTCCAAACCCTACTAATAGTACTATTACTACTTGCACCACCACAAATCCTTCAACACCAGAAGATTTGCCTAGTAGCTCATACACTCCTCCTTCTGATCCTTATGAGTTTTCTGATGACACTTCTGATACAAAGCTCAAATTCATGACATGTGTTCCTGAAACAATTCCACCAAGAATTTCATTCTCATTTCCAGTTCCTAGAGTTTCCTTTGCAAAAGGACCTGTTTCCCCTGCTACAACAAATTCCAAACTTGGAAGCTGTGATGTTTATATTGGATTTCATGGACAAAATCCGAATCTTATTCGATTTTGCAAGTGGCTTAAATCTGAGCTTGAGCTTCAAGGTATTGATTGTTTACTTGCTGATAGATCAAAGTATTCAGATATTCAAAGCCATGAGATTGCTGATAGAGTCATTTGCTCGGTTGCATTCGGTTTAGTGATCATCACAAGTTCGAGTTTTCTCAACCGTTTAAGCATGGAAGAGGTGAGATTCTTTGCTCAAAAGAAGAATTTGATTCCTATATTCTTTGATGCATTGCCTGCTGAGATTATTTCACTTCTTAATTGCAATTCAATTGATAAAGAATGTAAAGAAGCGATCGATGGACTCGTAAAATGCAATGAGTTTTGTCTAGAGGCTAATGATGGTAATTTGAGAAGTTGCATATCGAAAGTTTCGAGTATTTTAAGAGCAAGACTTGGTAGGAAGAATGTTGGTCATAAAGATAATCATAATATGCAAGGATTTGAGAATTTATTACCTTTTCCAAGGAATGCATATTTTGTTGGAAGAGAGAAAGAGATTATGGAGATTGAAGGTTTACTTTTTGGAAATAGGAACTTTATGGAACAACAAGTTCAAGATCATTATAGAGCAAGTGGTAGTGGACAATCTGAAGGACTTGCAGATGAAGAAAGTGAAAGTACAGTTGGAAAAGGCGGCGGTGGAAGGTATATAAGCCTAGAGATAGGGAGGAACAAAGAACCAAATTTAGAGGCTTGGATTGAACAACCAGTGGTAGGAAACAATTCATTGAAGAGGTTGAAGAATAAGAAGTCAAAAAGTGGAAGCTACAACAAGAGTTTGTGTAGTAGTAGCAGTGTGATTTGTATTAATGGAGTTTCTGGGATTGGAAAATCTGAATTGGCATTAGAGTTTGCTCATAGATATTACCAAAGGTACAAGATGGTTTTGTGGATCGGCGGTGAAGCTAGGAATCTTAGACAGAACATATTGAACTTGTCACGAAATTTCGGTTTGGATGTTGGTGCTGATACCGAGACAGAAAGAGGTCGAATTCGCAGCTTCGAGGAGCAAGAAATCGAGGCGTTCAAGAGAATCAAGAGGGAACTTTTTGGTGAAACGCCTTATTTGTTGATAATTGATAATCTTGAAACAGAAGAGGAATGGTGGGAAGGGAAAGATTTATATGATTTGATACCGAAAAACAACACTGGAGGGACTCATGTTATCATCACTACTCGGCTTTCGAAGGTAAAAAACTATGATACCATTCACCTTCCTCCATTACCATTATCTGATGCAATGATTTTGATTAAAGGAATGAAAAGTAAAGAGTATTCAATAGATGAGGTGAATTTCCTTGAAAAATTCTATGACAAACTTGGTAGGTTGAGTTTTGGTATGATGATGATTGGTTCATTATTGTCAGAACTTGCAATTAGCCCTTCTGCACTCTTTGAGTCTATAAACCAAGTTTCACTCAATGATGATTCAAACTCTTGTTGTTTGAGTATTGCACAAGAACAATGGTGCAAGAACAATCATTTCCTCATGAAGACACTCCTTTTTTGTTTAGAAACTTTGGAGAAAACTAAAGCAAAAGGGAATTTACTTGCTATAAGAATGCTTCTTGTTGGTGGTTGGTTTTCTCCTGCTCCAATTTCAGCCAATTTGTTAGTCAATGCGGCTAAGAGTGTTTCCGCAAGTGAAAATCATCTCAAGAAGTGGACAAGCTGTATGAGCCTAACATCGAGTTGTTTATCACCGCAGACGTGGAAAGACGAAGAAGATTCGGCTTCGCTTCTTGTGAAATTTGGACTAGCCAAAAGGACTAATCTACATGATGATGGATGTTGGCTTCGTTTCCATTCCATAACGCAAACATTTGCTAAAAGAAAAGGCGGTTTGAAATATGCAAAGGCTGCAATTCAAGGAGTGAGAAAAATGAGCAACCATGTTATCTCAGATCATTTATGGGAATCTGCTTTTCTTGTTTTTGGATTCAAATCCGAGCCTCCGGTCGTGGAACTAAAGGCAACCGACATGGTTTTGTACATCAAAAGAACAGCTCTACCACTCGCGATTCAAGCCTTCACCACGTTTTCAAGATGCAATTCGTCTTTAGAACTCTTAAAAGTTTGCACCAATGCACTTGAAGAAGTTGAAAAGTCTTTTGTGACTCAAATACAAGATTGGTCTCATGATTCAATTTGTTGGAAAAAAAGGTTGCAAAGAAGACAAAAAGTTGATGAATATGTTTGGCAGGATGTTACATTGTTGAAGGCAACATTGCTTGAGACTAGAGCTAAGTTGTTAGCAAGAGGAGGACATTTAGATAGTGGTAAGGAACTTTGTAGAACATGTATTAGTATTAGAACTGTGATGCTTGGTCATAACCATGCACAAACCTTGGCTGCTCAAGAGACATTGGCAAGGTTGGTGAGAATGAGGAGTAAGATATGA 2943 0.3748 MDSERNIEISSNNLKIKIATSSSKKQGEESLDNISNLPSPNIKSSIESSPYESPLVSPPSSAFVSALQSPYISPRATLPNPTNSTITTCTTTNPSTPEDLPSSSYTPPSDPYEFSDDTSDTKLKFMTCVPETIPPRISFSFPVPRVSFAKGPVSPATTNSKLGSCDVYIGFHGQNPNLIRFCKWLKSELELQGIDCLLADRSKYSDIQSHEIADRVICSVAFGLVIITSSSFLNRLSMEEVRFFAQKKNLIPIFFDALPAEIISLLNCNSIDKECKEAIDGLVKCNEFCLEANDGNLRSCISKVSSILRARLGRKNVGHKDNHNMQGFENLLPFPRNAYFVGREKEIMEIEGLLFGNRNFMEQQVQDHYRASGSGQSEGLADEESESTVGKGGGGRYISLEIGRNKEPNLEAWIEQPVVGNNSLKRLKNKKSKSGSYNKSLCSSSSVICINGVSGIGKSELALEFAHRYYQRYKMVLWIGGEARNLRQNILNLSRNFGLDVGADTETERGRIRSFEEQEIEAFKRIKRELFGETPYLLIIDNLETEEEWWEGKDLYDLIPKNNTGGTHVIITTRLSKVKNYDTIHLPPLPLSDAMILIKGMKSKEYSIDEVNFLEKFYDKLGRLSFGMMMIGSLLSELAISPSALFESINQVSLNDDSNSCCLSIAQEQWCKNNHFLMKTLLFCLETLEKTKAKGNLLAIRMLLVGGWFSPAPISANLLVNAAKSVSASENHLKKWTSCMSLTSSCLSPQTWKDEEDSASLLVKFGLAKRTNLHDDGCWLRFHSITQTFAKRKGGLKYAKAAIQGVRKMSNHVISDHLWESAFLVFGFKSEPPVVELKATDMVLYIKRTALPLAIQAFTTFSRCNSSLELLKVCTNALEEVEKSFVTQIQDWSHDSICWKKRLQRRQKVDEYVWQDVTLLKATLLETRAKLLARGGHLDSGKELCRTCISIRTVMLGHNHAQTLAAQETLARLVRMRSKI 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00154 980 Gene3D - 419 584 IPR027417 -
Trre5g00154 980 Gene3D - 149 278 IPR035897 -
Trre5g00154 980 MobiDBLite consensus disorder prediction 73 114 - -
Trre5g00154 980 MobiDBLite consensus disorder prediction 371 392 - -
Trre5g00154 980 MobiDBLite consensus disorder prediction 19 61 - -
Trre5g00154 980 SUPERFAMILY Toll/Interleukin receptor TIR domain 165 259 IPR035897 -
Trre5g00154 980 PANTHER DNA REPAIR PROTEIN RADA 45 975 - -
Trre5g00154 980 SMART AAA_5 444 602 IPR003593 GO:0016887
Trre5g00154 980 MobiDBLite consensus disorder prediction 73 116 - -
Trre5g00154 980 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 330 649 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00154 Trre-Chr5 887432 890374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00154 - - gmx:100781208 1462.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g00154 5 887432 890374 Trre5g00154 5 887432 890374 ECH