Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00069 ATGACTCAAATTATTATTAATAGTAATAATAGAGCTTCATGCAGAAAAAATCTCAAAGATGCTCTTGAAAGGTCCAGAAAACTTATGTCTACATTCTTGATAGTGAACATGAAGAAGATGTTAGTTTCATTACTATTTCAACTTGCAAGTTTGTGTTCCGTTGTTCTTTGTTGTCGAGTTGCTCCACTGCAAAAGGCTGGTATTGTTTCCCTTGTGAAGAATAGGACATCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTGTCAATGATTCAAATGGCTGATGTTGGAGTTGGTATCAGTGGACAAGAGGGTAGACAAGCTGTAATGTCATCAGACTTTGCAATGGGACAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGTCACTGGAATTACCAAAGACTTGGTTACACGATACTATACAATTTCTACAGAAATGCTCTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTACACTGCCTTCACTTTAACAACTGCTATAAATGAATGGAGTTCCACATTATATTCAATAATCTACAGTGCACTACCAACTATTATTGTTGGAATTCTCGACAAAGATCTTGGTAGAAGCACTCTCCTAAAGTTTCCTCAACTTTATAGTGCTGGCCAAAGAGATGAAGCCTACAACAAGAAACTGTTTCTGCTAACAATGGCTGATACTTTGTGGCAAAGCATGGTTATCTTTTGGCCTCCACTCTTTGCATATTGGAAAAGTACTATTGATGTAGCAAGTATAGGAGATCTTTGGACTCTTGCGACGGTTATTTTGGTCAATTTACATTTGGCTATGGATGTTGTTAGATGGTATTGGGTTACTCATGCTGTCATTTGGGGATCTATTGTTGCAACTTTCATTTCTGTCATGATCATTGATGCTATACCTATCATAACAGTTTGA 933 0.373 MTQIIINSNNRASCRKNLKDALERSRKLMSTFLIVNMKKMLVSLLFQLASLCSVVLCCRVAPLQKAGIVSLVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVPLLLIHGHWNYQRLGYTILYNFYRNALLVLVLFWYVLYTAFTLTTAINEWSSTLYSIIYSALPTIIVGILDKDLGRSTLLKFPQLYSAGQRDEAYNKKLFLLTMADTLWQSMVIFWPPLFAYWKSTIDVASIGDLWTLATVILVNLHLAMDVVRWYWVTHAVIWGSIVATFISVMIIDAIPIITV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00069 310 SUPERFAMILY Calcium ATPase, transmembrane domain M 72 307 IPR023298 -
Trre5g00069 310 Gene3D - 2 123 IPR023214 -
Trre5g00069 310 Pfam Phospholipid-translocating P-type ATPase C-terminal 111 305 IPR032630 -
Trre5g00069 310 SUPERFAMILY HAD-like 42 131 IPR036412 -
Trre5g00069 310 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 301 - -
Trre5g00069 310 Pfam haloacid dehalogenase-like hydrolase 74 101 - -
Trre5g00069 310 NCBIfam HAD-IC family P-type ATPase 53 169 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00069 Trre-Chr5 369860 371163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00069 1 308 Primary Pumps ATPases AT5G04930 68.868 5.07e-154 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00069 K14802 - gmx:100813982 523.087