Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00063 ATGTCGGACGAAGGCGAACCACATCGCCAAATTGTTTTGGGCATCAATGCACCAGGCATTGTTGAGTTTAAAGCTTCGGGTTCAAAGCCTCCTATCATTGAGATCGACACAGGAGCACACTTTCAGACTACCGAGGGGAATGAAGACCGCAATGTATTAATTGAATGGGCTCGTAAAATCGCCGTGAAGTTGAATTTTGGGATTATAATTGGCAAATCTGATTTTGGTGATAATAGGCGGAAACCATATTTCATGTTGCAATGCGAGCGAAGCGGTACCTATGTTTCAACAGGCAAGAAGTTGAAAACGGAAAAATCCGGGACAAGAAAATGTCAATGTCCCTTTCGTCTCCGTGGTTATTTGCATGTAACCGATCACAAATGGTACATCACCGTTGTCAACGGCACACACAACCACGAGCTGGATAAAGGACTTGAAGGGCATTTGATTGTTGGTCGATTGACGCGGAACGAGAAGGAGACTATGGATGAATTGACTCGAAATTTGGTGGCGCCAAAAAATATACTTGCCACTTTGAAGGAGAGAGATCCGGAGAACAAGACCAACCAAAGACAACTTTACAATGCTCGTTATCGTTTGAAAGTTTCTATGCGGGCTTCAATGACCGAAATGCAACTATTATTCAAGAAGTTCGCCGAAAAAAATTATTTTTTCAAGACGCGGTCGGTTGATGAAGAAGGAACGCCGGTGGTTCAGGATATTTTCTTTGCACATCCTAGGTCTATAAGTCTCTTCAACTCCTTTCATACCGTGTTGGCCATGGATTCGACGTACAAAACCAACAAATACAAAATGCCATTGTTTGAGATTGTTGGTTTTACATCAACGCAAAGAACCTTCAACGTCGGGTTTGCTTGGCTTAGTAACGAAAGAGAAGAAAACTTTGTATGGGCTCTCCAACAATGCCGTAGTCTCTTGAGAAGTGAGGACAAGATGCCGAAAGTGATCTTGACTGACAGAGATCAAGCGTTGGTGAATGCTGTGCCTCAGGTTTTTCCAACCTCGAGCTCGATGGTATGTCGTTGGCATGTGGAGAAGAATGTGTCTTCTAAGATGAAGGACTTAGTTCTCGTGAAAAGTGGAGAGGGGGTGAGACAATCCGCGGTATGGAATAACATAACAAATGCTTTTAGGGATATATTGGACTCGCCTACCGAAAAAGACTACATAGATAATGTGATGGAGTTTAGGAAACTATTTGCTAGGTGGCCAAGGTTTCTCCAATACGTTGAAGAAACGGTGTTGGACACCGACAAAGAAAAGGTCGTCCGAAATTGGGTGGACAATTTCATGCATATGGGCAATTATACCACGAACAGAGCCGAATCGGCACATGGTGTGTATAAGGGGTTGTTGAAGGACGGGAACGGCGATCTTGTGAAGGGTTGGGAAGTAATTGATAAAATGTTGATACTTCAGTTCACCGATGTGCAAACCCAGTTCAGTCAAAGTATGTCCGTTGCGGAGCATAGATACCAGGACAATCCTCTTTATTCATTTTTGTTTTACAAGATTTCAAGGGCCGCAATGGATCATATCTACAACGAAGCGAAAAGGGTTGAAGATGTTGGAATGGATAGCAAAAAATGTGGCTGTGTTATCAGAAGAACCTTCGGGTTACCGTGTGCATGTCTCATTGCTAAAAAGATGAAAAACAAGCTTCCTATTCGACTTGATGAGATATACAGTCATTGGAAGAAGCTATGTTTTGAGGAAGACGCTGTTGCTGCAGAAGTGACTGACGATTATGCTTGCTTGGCAGAGTGGCAAGCAATTCAGGAACGGTTGAGTAGATCTGATGTCAGTGTGAAAAATGATATTAGAAATCAACTCCGTCTAATTGCATTCCCGGAAACGACCAATTTGCAAGCGCCGGTGGAAGATGCGAAGTCAAAAGGTGCAAAGAAGAAAAAACGGGTTCGTGGCACAACTAGAGAAAAATCCCGTTTTGAACATGTTGACAAACGAGTGGCCGATTCGCAACCTTCTCAATCTAAGCCGTCAGGTTCACAAAAAAAACCATCAAGTTCACAAGCAAAGCCACCGGGGTCGACAAAGCTTAGCACAAAGGGTCCTATCGAGCTAGATGCGACACTGACAAGATCTGTTGAGGCTATCCTTGCAAGTTGTATTGGTCCTCAAGATTCAAACTATGTTCACATTTAA 2187 0.4326 MSDEGEPHRQIVLGINAPGIVEFKASGSKPPIIEIDTGAHFQTTEGNEDRNVLIEWARKIAVKLNFGIIIGKSDFGDNRRKPYFMLQCERSGTYVSTGKKLKTEKSGTRKCQCPFRLRGYLHVTDHKWYITVVNGTHNHELDKGLEGHLIVGRLTRNEKETMDELTRNLVAPKNILATLKERDPENKTNQRQLYNARYRLKVSMRASMTEMQLLFKKFAEKNYFFKTRSVDEEGTPVVQDIFFAHPRSISLFNSFHTVLAMDSTYKTNKYKMPLFEIVGFTSTQRTFNVGFAWLSNEREENFVWALQQCRSLLRSEDKMPKVILTDRDQALVNAVPQVFPTSSSMVCRWHVEKNVSSKMKDLVLVKSGEGVRQSAVWNNITNAFRDILDSPTEKDYIDNVMEFRKLFARWPRFLQYVEETVLDTDKEKVVRNWVDNFMHMGNYTTNRAESAHGVYKGLLKDGNGDLVKGWEVIDKMLILQFTDVQTQFSQSMSVAEHRYQDNPLYSFLFYKISRAAMDHIYNEAKRVEDVGMDSKKCGCVIRRTFGLPCACLIAKKMKNKLPIRLDEIYSHWKKLCFEEDAVAAEVTDDYACLAEWQAIQERLSRSDVSVKNDIRNQLRLIAFPETTNLQAPVEDAKSKGAKKKKRVRGTTREKSRFEHVDKRVADSQPSQSKPSGSQKKPSSSQAKPPGSTKLSTKGPIELDATLTRSVEAILASCIGPQDSNYVHI 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00063 728 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 561 IPR031052 GO:0006355
Trre5g00063 728 Pfam Transcription factor AFT 96 141 IPR014842 GO:0000981|GO:0036086
Trre5g00063 728 MobiDBLite consensus disorder prediction 667 692 - -
Trre5g00063 728 MobiDBLite consensus disorder prediction 651 666 - -
Trre5g00063 728 MobiDBLite consensus disorder prediction 632 700 - -
Trre5g00063 728 Pfam MULE transposase domain 258 354 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00063 Trre-Chr5 330507 335235 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre5g00063 MULE 1.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00063 - - tpra:123905216 870.537