Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00010 ATGTCAGAATTAGGCAAAGAGTGCGGAATAAGGCGACATCATCGAACATATTCGGATAGCATGCTATCTGAGCAACAGCAGCAGCAGCAGCAGGAAGTACCTTATTGGTTGAAAGATCTCCTTGATGATGATGATGATGAGCCTGGAGAATCAGAAGAGAAACTGAAGCCTAGTACTAATGTATGCAGCAGCAGCAGCAACAACAGCAGGACTCATAGAAGATCATCAAGTGACTCCTTAGCATACTTACATAATAAAACAATTCTTCAATATTCTCCAGAAAGGAAGGAACAAAATACTATGTATATTGTAGCTGCAGACCAACAACCCTCCTTTCTGCACCAAAATCATCCTAGAACTGATCATTCAAAACGCGGAAAAAGGCATTCAGCTCAACAATACCGGGCGAGGAAAGTTCAATACATTGGAGAACTAGAAAGAAGTATCCAAGCTTTACAGGCAGAAGGATATGAAGTTTCAGCAGAGCTTGAATTTCTTGATCAGCAAAACCTCATATTAGGTATGGAGAATAGGGCCCTCAAACAACGGTTGGACAGTTTATCCCAGGAGCACTTCGTCAAATGTTTGGAGCAGGAAGTGCTTGAGAGAGAAATCACAAGACTTAGAAATCTGTATCAACAACAACAACACAAACAGCAGCAGCAGCAACAACAGCAAAAGCATCATGGTAGGAATCGATCTAAACAACGTCAAGATCTTGATTCATCAATTGCCAAACTTTCTTTGAAGAATAAGGGAACCGAATCATCGCAGAAAGCCAGATAG 786 0.4122 MSELGKECGIRRHHRTYSDSMLSEQQQQQQQEVPYWLKDLLDDDDDEPGESEEKLKPSTNVCSSSSNNSRTHRRSSSDSLAYLHNKTILQYSPERKEQNTMYIVAADQQPSFLHQNHPRTDHSKRGKRHSAQQYRARKVQYIGELERSIQALQAEGYEVSAELEFLDQQNLILGMENRALKQRLDSLSQEHFVKCLEQEVLEREITRLRNLYQQQQHKQQQQQQQQKHHGRNRSKQRQDLDSSIAKLSLKNKGTESSQKAR 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00010 261 MobiDBLite consensus disorder prediction 212 227 - -
Trre5g00010 261 SUPERFAMILY Leucine zipper domain 127 178 IPR046347 GO:0003700|GO:0006355
Trre5g00010 261 MobiDBLite consensus disorder prediction 56 79 - -
Trre5g00010 261 MobiDBLite consensus disorder prediction 1 79 - -
Trre5g00010 261 Gene3D - 115 192 - -
Trre5g00010 261 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 114 IPR044797 -
Trre5g00010 261 Coils Coil 198 225 - -
Trre5g00010 261 MobiDBLite consensus disorder prediction 1 19 - -
Trre5g00010 261 MobiDBLite consensus disorder prediction 20 34 - -
Trre5g00010 261 MobiDBLite consensus disorder prediction 113 133 - -
Trre5g00010 261 MobiDBLite consensus disorder prediction 241 261 - -
Trre5g00010 261 MobiDBLite consensus disorder prediction 212 261 - -
Trre5g00010 261 SMART brlzneu 118 179 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00010 Trre-Chr5 55514 57257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00010 126 194 bZIP Transcription Factor Family AT2G42380 52.174 9.16e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00010 - - tpra:123914043 402.134