Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04211 ATGTCTCGTTTGAATGCAGATAAGAAGCTGCTTGGTGCAGGACGTGTTGTGGCTGTGGCTATTGAGAATAATAAAACAAGTCAACATGCTGTCAAATGGGCTGTTGAAAATCTTGTTCCCAAAGATCAACACCTCTTTCTCATCCATGTTAAACAAAAAACCAATTCTTCCACTTCCTCCATACCATGGGGAAATTATGCAGACAACAACAGTGCGAACAAAGATGCGATTGACAGTGAATGTAAAGATCTTTTTGATTCATTTCGTGTTTTCTGCAATAGAAAAAATATACAATGCCAAGAAATTTTGTTAGAGGGAACAGATATATCAAAGGCATTAATAGATTGCATTTCAACTTATGCTATCGAGCTTCTTGTACTAGGGGCATCATCAAGGTGTAGTGGCCTTGTTAGATTTAGGACAGCAGATGTTCCAACCACAGTTTCAAAAGCAGCACCAACATTTTGCACTGTATATATAATATCTAAAGGCAAAACCTCAAGTGTGAGATCTGCAACATCTCCAATTCCAAAACCAGCAGCAATGATAGCACCGCCAACACCATCACGTAGTCATCAATTTCAACAGCCACATGCAATGCCAACTCGAAGTCCCGAAAGATCAGATCCTCAATTGACACGTAACCACCCACCACGACGACCTTCATCGGAGAGGAATACAACATATGCCATGAGACAAGGGTTGGATGATGAACAAGAAATGATATCACCTTTCAACAGGAGAGGACACAAAGCATACGAGTCATCGGTTCCTGATTCAGATATATCATTTGTGAGTGGTGCAAGACCAACAATTGATCGAATATTCCCTTCATTGTATAACATTGATGATCTAGACACTACTAGTATTAGTAGTGGAATTTCCACCGGTAAGCTTTCGAGTAGCTTTGATTTTGATGCAAGAAGCAGCTCTGCTTCATCCTTTTCTAGGGGAGGAGGAGGTGGAGGACAAAACTCAATTGACTTGTCCTCTCCTAGTGATTACTATTCATTCGGCTCCCAAAGCAGTTCTGGTCCCAATTCCTCATCAAGGTCATCTGACGCTGATGAAGTCGAGGCAGAGATGAGGAGGCTCAAGCTTGAACTAAAACAGACAATGGAAATGTTCAGTTCAGCTCGCAAGGAAGCACTCACAGCAAAGCAGAAGGCAATGGAACTTCAACGTTGGAAATTCGAAGAAGAAAAGAAGTTGGAAGAGGCAAGAGAAGGTGAAGGAGCAGCAATGGCTATGGTAGAGTTGGAGCAAGAAAAATGTAAAGCTGCACTCAAAGCAGCTGAGGCATCTCAAAGAATTGCAACATTGGAAGCACAAAAACGAATGAATGCGGAGAGAAAAAGCGAAATAGAAGCAAGTCAGAGGAGGAAGGCAGAAGATTCTTATAGTTCAGTACATCACACTAGTGCCAGATATAGAAGATACGGTATTGAGGAAATTGAAGAGGCAACACAACGATTTTCAGATAGTCTCAAAATTGGTGAAGGAGGGTATGGTCCTGTTTATAGATGTGAACTTGATCATACACGGGTCGCTATCAAAGTGTTGAAATCAGATGCAGCTCAAGGAAGGGCACAATTCAACCAGGAAATTGAAGTGTTGAGTTGTATAAGACATCCAAACATGGTGCTTTTGTTAGGAGCATGTCCTGAATATGGTTGCATAGTGTATGAGTACATGGCTAATGGAAGTTTGGAGGATTGTTTGTTTAGAAGAAATAAGGCACCACCTCTTCCTTGGCAGTTGAGATTCCAAATTGCTGCTGAGATAGCTACTGGACTCCTTTTCCTTCACCAAAATAAACCGGAACCGATTGTGCATCGTGACTTAAAACCTGGAAACATTTTGCTTGACCGGAACTATGTGAGCAAGATTGGTGATGTTGGTTTGGCAAGGCTTGTTCCTCCTTCTGTTCAAGACACTATCACGCAGTATCGCATGACGTCAACTGCTGGAACTTTTTGTTACATTGACCCTGAATACCAGCAAACCGGCATGCTTGGTATCAAGTCTGATATTTACTCACTTGGAATCATGCTTTTACAAATTGTTACCGCCAAGCCTCCGATGGGTTTGACTCATCACGTTGATCGATCTATTGAGAAGGGAACTTTTCCTGACATGCTTGATCCTGCCGTTCAGGACTGGCCTATTGAACACGCCTTGCATTTTGCTAAACTTGCCCTTCAGTGTGCTGAAATGAGGAGAAAAGATAGACCTGATCTTGGAAAAGTTGTACTTCCTGAGCTCAACAAACTCAGAATATTCGCCGAAGAAAACATGCCTATGATGATGTTTAGAGGTAGTAGTTCAGCAACTTTCAATCCCAGAGGTAGTAGTTACTTCATCAACTCCACATCTTCTACAAATCAAGACATTATGAGTGAATCCAATTCTTTGTCTAGCAGCTCCGTATATGAAAGTCGTTCAAGCACATCATCATTGGAGAGACTGTAA 2472 0.4171 MSRLNADKKLLGAGRVVAVAIENNKTSQHAVKWAVENLVPKDQHLFLIHVKQKTNSSTSSIPWGNYADNNSANKDAIDSECKDLFDSFRVFCNRKNIQCQEILLEGTDISKALIDCISTYAIELLVLGASSRCSGLVRFRTADVPTTVSKAAPTFCTVYIISKGKTSSVRSATSPIPKPAAMIAPPTPSRSHQFQQPHAMPTRSPERSDPQLTRNHPPRRPSSERNTTYAMRQGLDDEQEMISPFNRRGHKAYESSVPDSDISFVSGARPTIDRIFPSLYNIDDLDTTSISSGISTGKLSSSFDFDARSSSASSFSRGGGGGGQNSIDLSSPSDYYSFGSQSSSGPNSSSRSSDADEVEAEMRRLKLELKQTMEMFSSARKEALTAKQKAMELQRWKFEEEKKLEEAREGEGAAMAMVELEQEKCKAALKAAEASQRIATLEAQKRMNAERKSEIEASQRRKAEDSYSSVHHTSARYRRYGIEEIEEATQRFSDSLKIGEGGYGPVYRCELDHTRVAIKVLKSDAAQGRAQFNQEIEVLSCIRHPNMVLLLGACPEYGCIVYEYMANGSLEDCLFRRNKAPPLPWQLRFQIAAEIATGLLFLHQNKPEPIVHRDLKPGNILLDRNYVSKIGDVGLARLVPPSVQDTITQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIVTAKPPMGLTHHVDRSIEKGTFPDMLDPAVQDWPIEHALHFAKLALQCAEMRRKDRPDLGKVVLPELNKLRIFAEENMPMMMFRGSSSATFNPRGSSYFINSTSSTNQDIMSESNSLSSSSVYESRSSTSSLERL 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04211 823 Gene3D Transferase(Phosphotransferase) domain 1 565 768 - -
Trre4g04211 823 MobiDBLite consensus disorder prediction 310 353 - -
Trre4g04211 823 Pfam Protein kinase domain 495 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g04211 823 MobiDBLite consensus disorder prediction 449 468 - -
Trre4g04211 823 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 156 - -
Trre4g04211 823 SMART serkin_6 492 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g04211 823 MobiDBLite consensus disorder prediction 169 228 - -
Trre4g04211 823 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 465 564 - -
Trre4g04211 823 PANTHER OS02G0152300 PROTEIN 16 818 - -
Trre4g04211 823 Gene3D HUPs 15 163 IPR014729 -
Trre4g04211 823 Coils Coil 355 382 - -
Trre4g04211 823 FunFam U-box domain-containing protein 51 565 765 - -
Trre4g04211 823 MobiDBLite consensus disorder prediction 310 359 - -
Trre4g04211 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Trre4g04211 823 MobiDBLite consensus disorder prediction 792 823 - -
Trre4g04211 823 Gene3D Phosphorylase Kinase; domain 1 469 564 - -
Trre4g04211 823 ProSiteProfiles Protein kinase domain profile. 492 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g04211 823 MobiDBLite consensus disorder prediction 188 208 - -
Trre4g04211 823 Pfam Universal stress protein family 15 153 IPR006016 -
Trre4g04211 823 CDD STK_N 16 164 - -
Trre4g04211 823 SUPERFAMILY Protein kinase-like (PK-like) 468 751 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04211 Trre-Chr4 51351044 51354273 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04211 1 780 Receptor kinase-like Gene Family AT1G78940 51.763 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre4g04211 Pkinase 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04211 - - gmx:100803837 929.472