Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04208 ATGTCTCGAAACGATAAGAAGCTTGGTGCAGGACGTGTGGTGGCTGTCGCAATTGAGAATAATAAAACAAGCCAACATGCAGCCAAATGGGCAGTTGAAAATCTTCTTCCCAAAGATCAATGTCTCTTTCTCATCCATGTTAGACAAACAACCAATTCTGCCACTTCCATACCATACAATGGTGAAGTGAACGAAGATGCCATTGACAACGAATCTAAAGATCTTTTTGATTCATTTCGTGTCTTCTGCAATAGAAAAAATATACAATGCAAAGAAATTTTGTTGGAGGAAACAGATATATCAAAGGCATTAACAGATTGCATTTCAAATTATGCTATCGAGCTTCTTGTACTAGGGGCATCATCAAGGAGTGGTCTTGTTAGAAAATTTAGGACAACAGATGTTCCAACCACAGTTTCAAAAGCAGCACCAACATTTTGCACTGTATATATAATATCAAAAGGCAAAATCTCAAGTGTGAGATCTGCAACAGCTCCAATTCCAAAACCAGCAGCAATGATAGCACCGCCAACACCATCACGTAGTCATCAATTTCAACAGCCACATGCAATGCCAACTCGAAGTCCTGAAAGACAAGAACCTCAATTGACACGTAACTACCCACCACGACATTCATCAGAGAGGAATGCAACATATGGCATGAGCCATGGGCTAGATGATGAACAAGAAATGATATCACCATTCAACAGGAGAGGACACAAAGCATACGACATTGATGATCTAGACACTACTAGTTTTAGTAGTGGAAATCCCACCGGTAGGCTTTCGAGTGGCTCTGATTTTGATGCAAGAAGCAGCTTTGCTTCATCCTTTTCTGGGGGAGGAGGAGGTGGAGGACAAAACTCAATTGACTTGTCATCTCCTATGGATAACTATTCATTCAGCTCCCAAGGCAGTTCTGGTCCCAATTCCTCATCAAGGATATCTGATGCCGCCGATGAAGTTGAAGCAGAGATGAGGAGGCTCAAGCTTGAACTCAAACAGACTATGGAAATGTATAGTTCTGCTTGCAAGGAAGCACTCACAGCAAAGCAGAAGGCAATGGAACTTCAACGTTGGAAATCCGAAGAAGAAAAGAAGTTGGAAGAGGCAAGAGAAGGTGAAGGAGCAGCTATGGCCATGGTCGAGTTGGAGCAAGAAAAATGTAAAGCTGCACTAAAAGCAGCCGAAGCATCTCAAAGAATTGCAACATTGGAAGCACAAAAGCGAATGAATGTGGAGAGAAAAGGCGAAATAGAAGCAAGTCAGAGGAAGAAGGCAGAAGATTCTTATAGTTCAGTACATCACACTAGTGCCAGATATAGAAGATACAGTATTGAGGAAATTGAAGAGGCAACACAACAATTTTCAGATAGTCTCAAAATTGGTGAAGGAGGATATGGTCCTGTTTATAGATGTGAACTTGATCATACACAAGTTGCTATCAAAGTGTTGAAATCAGATGCAGCTCAAGGAAGGGCACAATTCAACCAGGAAATTGAAGTGTTGAGTTGTATAAGACATCCAAACATGGTGCTTTTGTTAGGAGCATGTCCCGAATATGGTTGCATTGTGTATGAGTACATGGCTAAGGGAAGTTTGGATGATTGTTTATTTAGGAGAGGTAAGTCACCACCTCTTCCTTGGCAGTTGAGATTTCAAATTGCTGCTGAGATAGCTACTGGACTCCTTTTCCTTCACCAAAATAAACCGGAACCGATTGTGCATCGTGACTTAAAACCTGGAAACATTTTGCTTGATCGGAACTATGTGAGCAAGATTGGCGATGTTGGTTTGGCAAGGCTTGTTCCTCCTTCTGTTCAAGACACTGTCACACAGTATCGCATGACGTCAACTGCTGGAACTTTCTGTTACATTGATCCCGAGTACCAGCAAACTGGCATGCTTGGTATCAAATCTGATATTTACTCACTTGGAATCATGCTTTTACAAATTGTTACCGCCAAGCCTCCGATGGGTTTGACTCATCACGTTGGTCGATCTATTGACAAGGGAACTTTTCCTGAAATGCTTGATCCTGCCGTTCAGGACTGGCCTATTGAACACGCCTTGCATTTTGCTAAACTTGCCCTTCAGTGTGCAGAAATGAGGAGAAAAGATAGACCTGATCTTGGAAAAGTTGTACTTCCTGAGCTCAACAAACTCAGAATATTCGCCGAAGAAAACATGCCTATGATGATGTTTAGAGGTGGTAGTGCAGCAACATTCAATCCCAGAGGTGGCAGCAACTATTTCATCAACTCTACATCTTCTACAAATCAAGACATTATGAGTGAATCGAGTTCATCGTCTGGCATGTCCGGATATGAAAGTCGTTCAAGCACATCATCATTGGGGAGATTGTAA 2367 0.4191 MSRNDKKLGAGRVVAVAIENNKTSQHAAKWAVENLLPKDQCLFLIHVRQTTNSATSIPYNGEVNEDAIDNESKDLFDSFRVFCNRKNIQCKEILLEETDISKALTDCISNYAIELLVLGASSRSGLVRKFRTTDVPTTVSKAAPTFCTVYIISKGKISSVRSATAPIPKPAAMIAPPTPSRSHQFQQPHAMPTRSPERQEPQLTRNYPPRHSSERNATYGMSHGLDDEQEMISPFNRRGHKAYDIDDLDTTSFSSGNPTGRLSSGSDFDARSSFASSFSGGGGGGGQNSIDLSSPMDNYSFSSQGSSGPNSSSRISDAADEVEAEMRRLKLELKQTMEMYSSACKEALTAKQKAMELQRWKSEEEKKLEEAREGEGAAMAMVELEQEKCKAALKAAEASQRIATLEAQKRMNVERKGEIEASQRKKAEDSYSSVHHTSARYRRYSIEEIEEATQQFSDSLKIGEGGYGPVYRCELDHTQVAIKVLKSDAAQGRAQFNQEIEVLSCIRHPNMVLLLGACPEYGCIVYEYMAKGSLDDCLFRRGKSPPLPWQLRFQIAAEIATGLLFLHQNKPEPIVHRDLKPGNILLDRNYVSKIGDVGLARLVPPSVQDTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIVTAKPPMGLTHHVGRSIDKGTFPEMLDPAVQDWPIEHALHFAKLALQCAEMRRKDRPDLGKVVLPELNKLRIFAEENMPMMMFRGGSAATFNPRGGSNYFINSTSSTNQDIMSESSSSSGMSGYESRSSTSSLGRL 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04208 788 MobiDBLite consensus disorder prediction 754 788 - -
Trre4g04208 788 PANTHER OS02G0152300 PROTEIN 13 741 - -
Trre4g04208 788 MobiDBLite consensus disorder prediction 277 321 - -
Trre4g04208 788 SMART serkin_6 456 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g04208 788 FunFam U-box domain-containing protein 51 529 729 - -
Trre4g04208 788 MobiDBLite consensus disorder prediction 415 434 - -
Trre4g04208 788 Pfam Protein kinase domain 459 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g04208 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 574 586 IPR008271 GO:0004672|GO:0006468
Trre4g04208 788 ProSiteProfiles Protein kinase domain profile. 456 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g04208 788 MobiDBLite consensus disorder prediction 277 317 - -
Trre4g04208 788 SUPERFAMILY Protein kinase-like (PK-like) 432 715 IPR011009 -
Trre4g04208 788 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 429 528 - -
Trre4g04208 788 MobiDBLite consensus disorder prediction 249 268 - -
Trre4g04208 788 Pfam Universal stress protein family 12 145 IPR006016 -
Trre4g04208 788 Gene3D Phosphorylase Kinase; domain 1 424 528 - -
Trre4g04208 788 MobiDBLite consensus disorder prediction 169 221 - -
Trre4g04208 788 CDD STK_N 13 155 - -
Trre4g04208 788 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 139 - -
Trre4g04208 788 Gene3D Transferase(Phosphotransferase) domain 1 529 731 - -
Trre4g04208 788 MobiDBLite consensus disorder prediction 179 219 - -
Trre4g04208 788 Gene3D HUPs 11 152 IPR014729 -
Trre4g04208 788 Coils Coil 312 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04208 Trre-Chr4 51321450 51324523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04208 6 744 Receptor kinase-like Gene Family AT1G78940 53.867 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre4g04208 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04208 - - gmx:100803837 913.679