Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04203 ATGATTAACTTTGGTCAAAAGTTGCAAAATCTTTGTAGTTTCTTTCCCAACAACTTTCATGGTTCCTTGACTCGTGCTTTATCATTCCAATTGAAATTCAACAATTTTTCCATTCAACTTTGTTATTTCATTATCCTTTCTCTATTTGGTTACTTGGGTCTCAAGTTTTCAAACCCAAGATCTACTATTAGACCCAATGACTTTGATCTGTTTTACACCTCTGTTTCTGCTTCCACTGTTTCTAGCATGACATCAATAGAAATGGAAGTTTTCTCTAATTTTCAGCTTATTCTTCTTACCTTTCTTATGTTAGTTGGTGGTGAAGTTTTTACTTCCATGCTTCAACTTTTCTTTGATAGGTTCAGTTTCACACAAAAAAATCATTGTGTCAAAAATGAATGTAGTTGTTGTTATAGTAGTACAACTAACTCACTTAATAATAAAATCAATCAAATTGAACTTGGTTTGGTTTGTATTCCTCAATCACAAAATCATGCTCAAATTGATAAAAATAATATTATCGATAAAGATAAAATTAAGTATAATTCTCTTAGGTATCTAAGTTATGTAGTTTTGTGTTACCTTATGGTGGTTCATTTTTTTGGTTTTAGTTTGATCACTTTGTACATAACCTATGTACCAAGTGCTAAAAATATACTAAGAAAAAAAGGCATCAACATAGAAACATTTTCTTTATTTACCATAGTTTCAACATTTGCAAGTTGTGGTTATGTACCTACCAATGAAAACATGATGGTTTTCAAAAAGAATTCAGGACTTTTACTTCTTATTCTTCCACATGTACTTTTAGGTAATGCCCTTTATGCACCATGTTTGAGGCTATTGATAACAGTTTTGAAAAGTGTTACTAATAGAGAGGAATTCTCTTACTTGCTGAATAATTCAAAGAAAATGGGTTATGATCATTTGCTCTCTCCTCTTCATTGTTGGAACCTTGTTGGCACTGTCTTTGGTTTCAATGTGATACAACTTATATTGTTTTGTTCTATGGAGTGGAGTTCCAAGATTATGGAAGGACTAAATATCTATCAAAAACTTGTTGCATCTTTGTTTCAAGTTACAAATGTTAGACATTCCGGTGAATCTGTTTTTGATACCTCCTCTATCTCTTCAGCCATATTGGTGCTCTTTGTTGTCATGATGTATCTCCCACCATACACAACATTTTTACCCGTCATGGACCACGAAAATGATGTGAAGAGAGACCAAAAAAGCCTAGTGGAGTGTCTTGTATTCTCTCAACTATCTTATTTGGTTATTTTTATTATTCTCATTTGCATCACCGAAAGACAAAGCTTAAAAGATGATCCCCTCAACTTCAACGTCTTGAATGTCACCCTAGAAGTCATCAGTGCTTATGGGAACGTAGGGTTGTCGACAGGATATAGCTGCTCAAGGCAATTGAAATCGGATTTAACGTGCAAAGATTCATGGATTGGATTTTCGGGAAGGTGGAGTATCGAAGGGAAATTGATCCTTATCTTTGTAATGTTCTTTGGTAGGCTCAAGAAATTCAACATGAATGGAGGCAAAGCATGGCATCTGTCCTAG 1572 0.3384 MINFGQKLQNLCSFFPNNFHGSLTRALSFQLKFNNFSIQLCYFIILSLFGYLGLKFSNPRSTIRPNDFDLFYTSVSASTVSSMTSIEMEVFSNFQLILLTFLMLVGGEVFTSMLQLFFDRFSFTQKNHCVKNECSCCYSSTTNSLNNKINQIELGLVCIPQSQNHAQIDKNNIIDKDKIKYNSLRYLSYVVLCYLMVVHFFGFSLITLYITYVPSAKNILRKKGINIETFSLFTIVSTFASCGYVPTNENMMVFKKNSGLLLLILPHVLLGNALYAPCLRLLITVLKSVTNREEFSYLLNNSKKMGYDHLLSPLHCWNLVGTVFGFNVIQLILFCSMEWSSKIMEGLNIYQKLVASLFQVTNVRHSGESVFDTSSISSAILVLFVVMMYLPPYTTFLPVMDHENDVKRDQKSLVECLVFSQLSYLVIFIILICITERQSLKDDPLNFNVLNVTLEVISAYGNVGLSTGYSCSRQLKSDLTCKDSWIGFSGRWSIEGKLILIFVMFFGRLKKFNMNGGKAWHLS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04203 523 Pfam Cation transport protein 418 510 IPR003445 GO:0006812|GO:0008324|GO:0055085
Trre4g04203 523 Pfam Cation transport protein 176 390 IPR003445 GO:0006812|GO:0008324|GO:0055085
Trre4g04203 523 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 29 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04203 Trre-Chr4 51240421 51245362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04203 55 522 Inorganic Solute Cotransporters AT4G10310 49.587 3.88e-151 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04203 K24976 - gmx:100779582 694.115