Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04202 ATGGAGATCTTAGGTTGTTTTATGAAAAAGTTGCAACTCCTTTGTAACACTTCATGTCGAAAACTTACTTGTGTAACCAAATCAATTTTTTTCTTAGCAGCATATTTTTATCGCTTCATTCTCCTAAGAGCAAATCCATTATGGGTTCAAATTGTATATTTCATTTCTATTTCCATTTTTGGGTTTGGATTTCTCAAAGCTCTAAACCCTTTAGATCATACAAATAAAACTAAGAACTTAGATTTGTTCTTCACATCCGTTTCAGCCACAACAGTTTCAAGCATGTCCACAGTTGAAATGGAAATATTTTCTAACACTCAACTAATCATCATTACCATCTTAATGTTCATAGGTGGTGAAGTCTTTACCTCAATGGTAGGACTTCATTTCGTTAGATCAAGGCTCAAAACCGGTCACCATAAAATCGATACATCTCATGGACGTCTTGCTTCTACAAACCCCATCATTGTTGATCTTGAAGTTGAAATGGTCACAAATGAGGTACACAATAATAAATCACATGATCAATCTTTCAATAACACTACTACAAGTGAAAATTTGAGGTACTCGTCAATGAAATATTTGGTTTATGTAATTCTTGGTTACATTGTAATTCTCCATATTATAGGACTATTTGGGGTTTCTCTTTACCTTACAATGATTCCTAGTGTTAAACAGGTACTAAAAAACAAGGGTCTAAAAATGTCAACATTTTCTATTTTTATTATAGTCTCAACTTTTGCAAATTGTGGATTTGTTCCGACAAACGAAAACATGATTGTTTTTAGAAAGAATTCGGGTCTTCTTCTTATTCTGATTCCACAACTACTTGTTGGGAACACAATTTACCCTCCATGCTTGAGATTTTGTATATGGGTATTAGGGAAATTTTACAAGAAGAAAGAGTGTAATTATCTTTTGAAGAATTCAGAGGAAGTTGGTTACAAACATTTGTTAAAAGGGAAACACTCTGTTTTTCTTGTGGGAACTGTATTTGGGTTTGTTGTTGTTCAGTTTACTCTGTTTTGTGTTATGGATTGGAACTCAAAAGGTTTGAAGGAATTGAATTATTATGAGAAAATGATTGGTGTGTTATTCCAAAGCATAAATTCAAGACACGCTGGAGAAACTATTTTGGACCTCTCAATATTATCACAAGCCGTCTTGGTACTATTTGTCTTCATGATGTACCTTCCACCTTACACCTCATTCCTCCCATTGAAAGATAATAATAATGGGAAAAATTCAGAAAGCAGTGACATGATGAAAAAGAGAAGAGGAAAAGTTACGGAAATTGTGATATTATCTCCGCTCTCCATTCTAGTCATATTCATAATACTAGTGTGCATAACTGAGAGGAAACAATTGAAGGATGATCCTCTCAATTTCAACGTTTTCAATATTGCTATTGAAATTATCAGTGCATATCGGAACGTAGGATTTACTATGGGATACAGTTGTGAAAGACAGTTGCATCCAGAGGCAAATTGTGAAAACAAGTGGATTGGATTTGTTGGAAAATGGAGTGATGAGGGTAAGATCATTCTTATACTTATTATGTTATTAGGAAGATTCAAGAAATTCAATATTGATGGAGGAAATCCATGGAAACTTCTATGA 1620 0.3358 MEILGCFMKKLQLLCNTSCRKLTCVTKSIFFLAAYFYRFILLRANPLWVQIVYFISISIFGFGFLKALNPLDHTNKTKNLDLFFTSVSATTVSSMSTVEMEIFSNTQLIIITILMFIGGEVFTSMVGLHFVRSRLKTGHHKIDTSHGRLASTNPIIVDLEVEMVTNEVHNNKSHDQSFNNTTTSENLRYSSMKYLVYVILGYIVILHIIGLFGVSLYLTMIPSVKQVLKNKGLKMSTFSIFIIVSTFANCGFVPTNENMIVFRKNSGLLLILIPQLLVGNTIYPPCLRFCIWVLGKFYKKKECNYLLKNSEEVGYKHLLKGKHSVFLVGTVFGFVVVQFTLFCVMDWNSKGLKELNYYEKMIGVLFQSINSRHAGETILDLSILSQAVLVLFVFMMYLPPYTSFLPLKDNNNGKNSESSDMMKKRRGKVTEIVILSPLSILVIFIILVCITERKQLKDDPLNFNVFNIAIEIISAYRNVGFTMGYSCERQLHPEANCENKWIGFVGKWSDEGKIILILIMLLGRFKKFNIDGGNPWKLL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04202 539 Pfam Cation transport protein 185 494 IPR003445 GO:0006812|GO:0008324|GO:0055085
Trre4g04202 539 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 38 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04202 Trre-Chr4 51231804 51238803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04202 74 538 Inorganic Solute Cotransporters AT4G10310 46.681 3.84e-140 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04202 K24976 - vvi:100242150 575.089