Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04201 ATGGTAGGACTTCATTTCATTAGATCAAGACTTAAAACTGATTTAGATAAAATAGCTTCTTCTCATGCACGTCTTGCTTCTCTAAACCCTTTCATTCTTGATCAAATTCATCTTGAACTTGAAATGGTCACAAATGAATCTTTACATAGTATATCACATGAATCTTTACATAGTATATCACATGAATCTTTTCATAATAAATCACACCAATCTTTGCACAATATTTCACATGAATCATTGAGTACAACAAATGAAAATTTAAGGTACTTGTCTATGAAATATTTGGGTTATGTAGTTCTTGGTTACATTGTAATTCTACATATTACAGGTGTATTTGGGGTTACTCTTTACCTTGAAATGATTCCTAGTGCCAAACAAGTATTAAAAAACAAGGGTCTAAACATGACCACATTCTCTATTTTTACAATAGTTTCAACATTTGCAAATTGTGGTTTTGTTCCAACAAATGAGAACATGGTTGTTTTTAGACAAAATTCAGGTCTTCTACTTATGCTTATCCCACAAGTACTTCTTGGGAACACATTGTACCCTGCATGTTTAAGATTTTGCATATGGGTATTGGGAAAATTTTACAAGAAGAAAGAGTGTAATTATCTTTTGAAACATACACAAGAGGTTGGTTACAAACACTTGCTTCAGGGGAAACACTCTGTTTTTCTTGTGGCTACTGTTTTTGGGTTGATTGTGGTTCAAGTTACATTGTTTTGTGTAATGGATTGGGATTCAGAAGGTTTGAAGGGTTTGAATAATTATCAGAAATTGATTGGTGTGTTGTTTCAAAGTGTGAATTCAAGACATACAGGAGAAAGTATTGTGGATATCTCAATTCTGTCACAAGCCATGTTGGTATTGTTTGTGCTCATGATGTACCTTCCTCCTTACACCTCATTCCTCCCCAAAAAAGATGATAAAAAAAATTCAGAAAGTAGTAAGAGGATGAAAAAGAGAAGAGGAAAGGTCACACAGAATTTGATATTATCTCAACTCTCCTATTTAGTTATATTCATAATACTAGTGTGCATAACCGAGAGGAAAAAATTGAAGGAAGATCCTCTCAATTTCAACGTTCTAAATATTGTTGTTGAAGTTATCAGTGCGTATGGGAGCGTAGGATTTAGTACAGGATACAGTTGTGAAAGACAGTTGCATCCAGAGGCAAATTGTGAAAATAAGTGGTTTGGATTTGTTGGAAAATGGAGTGATGAGGGTAAAATTATTCTTATACTTGTTATGTTGTTTGGAAGGCTCAAAAAATTCAATATGAATGGAGGCAAGGCATGGAAACTTCTATGA 1314 0.3349 MVGLHFIRSRLKTDLDKIASSHARLASLNPFILDQIHLELEMVTNESLHSISHESLHSISHESFHNKSHQSLHNISHESLSTTNENLRYLSMKYLGYVVLGYIVILHITGVFGVTLYLEMIPSAKQVLKNKGLNMTTFSIFTIVSTFANCGFVPTNENMVVFRQNSGLLLMLIPQVLLGNTLYPACLRFCIWVLGKFYKKKECNYLLKHTQEVGYKHLLQGKHSVFLVATVFGLIVVQVTLFCVMDWDSEGLKGLNNYQKLIGVLFQSVNSRHTGESIVDISILSQAMLVLFVLMMYLPPYTSFLPKKDDKKNSESSKRMKKRRGKVTQNLILSQLSYLVIFIILVCITERKKLKEDPLNFNVLNIVVEVISAYGSVGFSTGYSCERQLHPEANCENKWFGFVGKWSDEGKIILILVMLFGRLKKFNMNGGKAWKLL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04201 437 Pfam Cation transport protein 79 392 IPR003445 GO:0006812|GO:0008324|GO:0055085
Trre4g04201 437 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 58 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04201 Trre-Chr4 50641681 50650495 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04201 93 436 Inorganic Solute Cotransporters AT4G10310 51.558 7.19e-126 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04201 K24976 - vvi:100242150 514.612