Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04200 ATGAATTTCTTATATTGTTTTGGGAATAAATTGCAACATTTTTGTAGCACATCATGCCAAAAAATTACTTATCTCATCAAATCAATTTTTTTCTTAGTAGCATGTTTTTGTCGCTTCATTCTCCTTAGAGCAAATCCATTATGGGTTCAAATTGTATATTTCATTTCTATTTCCATTTTGGGTTTTGGATTTCTCAAAACTTCAAACTCTTTAGATCAAACACCTAAAAACTTAGATTTGTTCTTCACATCCATTTCTGCTACAACAGTTTCAAGCATGTCAACAGTTGAAATGCAAGTTTTTTCTAACCCTCAACTAATCATCATTACCATCTTAATGTTCATAGGTAGTGAAATTTTCACATCAATGGTAGGACTTCATTTCATTAGATCAAGACTTAAAACTGATTTAGATAAAATAGCTTCTTCTCATGCACGTCTTGCTTCTCTAAACCCTTTCATTCTTGATCAAATTCATCTTGAACTTGAAATGGTCACAAATGAATCTTTACATAGTATATCACATGAATCTTTACATAGTATATCACATGAATCTTTTCATAATAAATCACACCAATCTTTGCACAATATTTCACATGAATCATTGAGTACAACAAATGAAAATTTAAGGTACTTGTCTATGAAATATTTGGGTTATGTAGTTCTTGGTTACATTGTAATTCTACATATTACAGGTGTATTTGGGGTTACTCTTTACCTTGAAATGATTCCTAGTGCCAAACAAGTATTAAAAAACAAGGGTCTAAACATGACCACATTCTCTATTTTTACAATAGTTTCAACATTTGCAAATTGTGGTTTTGTTCCAACAAATGAGAACATGGTTGTTTTTAGACAAAATTCAGGTCTTCTACTTATGCTTATCCCACAAGTACTTCTTGGGAACACATTGTACCCTGCATGTTTAAGATTTTGCATATGGGTATTGGGAAAATTTTACAAGAAGAAAGAGTGTAATTATCTTTTGAAACATACACAAGAGGTTGGTTACAAACACTTGCTTCAGGGGAAACACTCTGTTTTTCTTGTGGCTACTGTTTTTGGGTTGATTGTGGTTCAAGTTACATTGTTTTGTGTAATGGATTGGGATTCAGAAGGTTTGAAGGGTTTGAATAATTATCAGAAATTGATTGGTGTGTTGTTTCAAAGTGTGAATTCAAGACATACAGGAGAAAGTATTGTGGATATCTCAATTCTGTCACAAGCCATGTTGGTATTGTTTGTGCTCATGATGTACCTTCCTCCTTACACCTCATTCCTCCCCAAAAAAGATGATAAAAAAAATTCAGAAAGTAGTAAGAGGATGAAAAAGAGAAGAGGAAAGGTCACACAGAATTTGATATTATCTCAACTCTCCTATTTAGTTATATTCATAATACTAGTGTGCATAACCGAGAGGAAAAAATTGAAGGAAGATCCTCTCAATTTCAACGTTCTAAATATTGTTGTTGAAGTTATCAGTGCGTATGGGAGCGTAGGATTTAGTACAGGATACAGTTGTGAAAGACAGTTGCATCCAGAGGCAAATTGTGAAAATAAGTGGTTTGGATTTGTTGGAAAATGGAGTGATGAGGGTAAAATTATTCTTATACTTGTTATGTTGTTTGGAAGGCTCAAAAAATTCAATATGAATGGAGGCAAGGCATGGAAACTTCTATGA 1680 0.3274 MNFLYCFGNKLQHFCSTSCQKITYLIKSIFFLVACFCRFILLRANPLWVQIVYFISISILGFGFLKTSNSLDQTPKNLDLFFTSISATTVSSMSTVEMQVFSNPQLIIITILMFIGSEIFTSMVGLHFIRSRLKTDLDKIASSHARLASLNPFILDQIHLELEMVTNESLHSISHESLHSISHESFHNKSHQSLHNISHESLSTTNENLRYLSMKYLGYVVLGYIVILHITGVFGVTLYLEMIPSAKQVLKNKGLNMTTFSIFTIVSTFANCGFVPTNENMVVFRQNSGLLLMLIPQVLLGNTLYPACLRFCIWVLGKFYKKKECNYLLKHTQEVGYKHLLQGKHSVFLVATVFGLIVVQVTLFCVMDWDSEGLKGLNNYQKLIGVLFQSVNSRHTGESIVDISILSQAMLVLFVLMMYLPPYTSFLPKKDDKKNSESSKRMKKRRGKVTQNLILSQLSYLVIFIILVCITERKKLKEDPLNFNVLNIVVEVISAYGSVGFSTGYSCERQLHPEANCENKWFGFVGKWSDEGKIILILVMLFGRLKKFNMNGGKAWKLL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04200 559 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 16 558 - -
Trre4g04200 559 Pfam Cation transport protein 200 514 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04200 Trre-Chr4 50641681 50650861 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04200 75 558 Inorganic Solute Cotransporters AT4G10310 46.045 9.29e-144 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04200 K24976 - twl:119997267 635.18