Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04197 ATGAATATCTTAAATTGTTTTGTGACAAAGTTGAAACACCTTTGTAGCACATCATGCAAAACAATTGCTTGTCTTAGCAAATCAATTTTTGTCATAGCAGCATGTTTTTGTCGCTTCATCTTCCTAAGAGCAAATCCATTATGGATTCAAATTGTATATTTCATTTCTATTTCCATTTTGGGTTTTGGATTTCTCAAAGCTACAAACCCTTTAGATCAAACACCTAAAAACTTAGATTTGTTCTTCACATCCATTTCAGCCACAACAGTTTCAAGCATGTCCATAGTTGAAATGCAATTTTTTTCTAACCATCAATTAATCATCATTACCATCTTAATGTTCATAGGTGGTGAAGTATTTACATCAATGGTAGGGCTTTATTTCATTAGATTAAGACTCAAAACTAATTTTGAACTTGAAATGGTCACAAACGAGGTACACAATAAATCACATGAATCATTGAGTACTAAAAATGAAAATTTAAGGTGCATGTCTATGAAATATTTGGGTTATGTAATTCTTGGTTATATTTTAATTATACATATCATAGGTATATTTGGGGTGTCACTTTACCTTACAATTATTCCTAGTACTAAACAAATACTAAAACACAAGGGTCTTAAAATGTGGACATTCCTAGTTTCTACTTTTTCTAGTTGTGGTTTTGTTCCAACAGACGAAAACATGGTTGTTTTTAGACAAAATTCAGGCCTTCTTCTTATGCTTATTCCACAAATACTTGTTGGGAACACATTGTACCCTGCATGCTTGAGATTTTGCATATGGGTATTGGGAAAATTTTACAAGAAGAAAGAGTGTAGCTATCTTTGGAAGCATTCTGAGGAAGTTGGTTACAAACACCTGTTAGAGGGGAAACAAACTGTTTTTCTTGTGGCTACTGTTTTTGGTTTGATTGTTGTTCAAGTTACATTGTTTTGTGTGATGGATTGGGATTCAAAAGGTTTGAAGGGTTTGAATAATTATCAGAAATTGATTGGTGTGTTGTTTCAAAGTGTGAATTCAAGACATACAGGAGAAAGTATTGTGGATATCTCAATTCTGTCACAAGCCATGTTGGTATTGTTTGTGATCATGATGTACCTTCCTCCTTACACCTCATTCCTCCCATTAAAATATGATAGGAGAAATTCAAGCAGTAAGAGGATGAAAAAGAGAAGAGGAAAAGTTACAGAGAATTTGATATTATCTCAACTCTCCTATATATTTAGTCATATTCATCATACTAAGCTGGAAGTTAGTAGAAATTGCAAGGACTTGAAGGAACAAATTTGGGAATAG 1299 0.3287 MNILNCFVTKLKHLCSTSCKTIACLSKSIFVIAACFCRFIFLRANPLWIQIVYFISISILGFGFLKATNPLDQTPKNLDLFFTSISATTVSSMSIVEMQFFSNHQLIIITILMFIGGEVFTSMVGLYFIRLRLKTNFELEMVTNEVHNKSHESLSTKNENLRCMSMKYLGYVILGYILIIHIIGIFGVSLYLTIIPSTKQILKHKGLKMWTFLVSTFSSCGFVPTDENMVVFRQNSGLLLMLIPQILVGNTLYPACLRFCIWVLGKFYKKKECSYLWKHSEEVGYKHLLEGKQTVFLVATVFGLIVVQVTLFCVMDWDSKGLKGLNNYQKLIGVLFQSVNSRHTGESIVDISILSQAMLVLFVIMMYLPPYTSFLPLKYDRRNSSSKRMKKRRGKVTENLILSQLSYIFSHIHHTKLEVSRNCKDLKEQIWE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04197 432 Pfam Cation transport protein 76 368 IPR003445 GO:0006812|GO:0008324|GO:0055085
Trre4g04197 432 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 8 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04197 Trre-Chr4 50623191 50625856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04197 66 408 Inorganic Solute Cotransporters AT4G10310 42.973 5.15e-90 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04197 K24976 - twl:119997267 417.157