Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04169 ATGGGTCGGCGTAGAAGCAAAAATCAAACCAACCAAGAAGAAGAAAAGATTAACAACAACACAAACAACATGGAAATCAACAACAACAATCACCTTCAATTTCAGGATGCTGACGAGGTAATTGAGGATGCTGGTGAAACATCCAACCTCGACCAATCAATGGGTGGTTGTGAACTTGATGATTCCAATGACAAAACCAGCGCTGATTACTACTTTGATTCTTACTCTCACTTTGGAATTCATGAAGAAATGTTGAAGGACACCGTAAGAACCAAAACATATCAAAATGTTATTTATCAGAATAGGTTTTTATTCAAGGATAAAGTAGTTCTTGATGTCGGTGCCGGGACTGGTATTTTATCACTGTTCTGTGCCAAAGCAGGGGCAGCACATGTCTATGCAGTTGAGTGCTCTCAAATGGCTGACAGGGCAAAGGAAATAGTTGAAGCTAATGGTTTCTCTAACGTTATAACAGTTTTGAAAGGGAAGATTGAAGAACTTGAACTTCCAGTTCCTAAGGTTGATATAATCATTTCCGAATGGATGGGATATTTCTTGTTGTTTGAGAACATGTTAAATTCTGTGCTCTATGCACGCGACAAATGGCTTGTGGATGATGGAGTTATTTTACCGGATATTGCATCGCTCCATATCACTGCCATTGAAGATAAAGATTACAAAGAAGATAAAATTGAGTTTTGGAATAATGTCTATGGATTTGACATGAGCTGCATCAAGAAGCAAGCGTTGATGGAGCCTCTTGTCGACACAGTAGACCAGAATCAGATTGCGACGAACTCTCAGCTACTCAAGACCATGGACATCTCAAAAATGTCCCCAGGAGATTGTTCATTCACAGCACCTTTTAAGCTTGTAGCTAATCGTGACGATTTTATTCATGCTCTTGTGGCATATTTCGATGTATCATTTACAAAGTGTCATAAATTGATGGGCTTCTCAACAGGGCCAAAATCGCGGAGTACACATTGGAAACAAACAGTCCTATATCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGACAATTGTAGGAAGCATGACTGTGGCCCCAAACAAAAAGAATCCCCGCGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAGTGCTTCGAGGGTTCAGTATTACAAGATGCGTTAG 1170 0.4017 MGRRRSKNQTNQEEEKINNNTNNMEINNNNHLQFQDADEVIEDAGETSNLDQSMGGCELDDSNDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNRFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADRAKEIVEANGFSNVITVLKGKIEELELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDDGVILPDIASLHITAIEDKDYKEDKIEFWNNVYGFDMSCIKKQALMEPLVDTVDQNQIATNSQLLKTMDISKMSPGDCSFTAPFKLVANRDDFIHALVAYFDVSFTKCHKLMGFSTGPKSRSTHWKQTVLYLEDVLTICEGETIVGSMTVAPNKKNPRDVDIMLKYSLNGRRCSASRVQYYKMR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04169 389 Pfam Methyltransferase domain 110 182 IPR041698 -
Trre4g04169 389 Gene3D Vaccinia Virus protein VP39 59 211 IPR029063 -
Trre4g04169 389 Gene3D - 214 389 - -
Trre4g04169 389 FunFam Blast:Protein arginine N-methyltransferase 1 213 389 - -
Trre4g04169 389 FunFam probable protein arginine N-methyltransferase 1 59 211 - -
Trre4g04169 389 MobiDBLite consensus disorder prediction 1 26 - -
Trre4g04169 389 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 23 384 IPR025799 GO:0016274|GO:0018216
Trre4g04169 389 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 68 369 IPR025799 GO:0016274|GO:0018216
Trre4g04169 389 CDD AdoMet_MTases 110 210 - -
Trre4g04169 389 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 388 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04169 Trre-Chr4 50417423 50421004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04169 8 351 C2H2 Transcription Factor Family AT3G12270 36.612 9.54e-68 223