Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04150 ATGATAGACATGAGCATACATTCTGCATATGTCAAAGCAATCAGAGTAGCACAGAAGTTCATTTATATTGAGAATCAATATTTTCTCGGATCATCATATAATTGGGATTCGTACAAAGACCTCAGTGCAAACAACTTAATTCCAATGGAAATTGCGCTAAAAATAGTGTTCCTTCAAGTACAGCTATGCAACGAATTCTCTTTTGGCAGGTTGAGGTTTCCACTACTGGTATTCAACTTCACCAACAAATGA 252 0.3611 MIDMSIHSAYVKAIRVAQKFIYIENQYFLGSSYNWDSYKDLSANNLIPMEIALKIVFLQVQLCNEFSFGRLRFPLLVFNFTNK 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04150 83 SUPERFAMILY Phospholipase D/nuclease 5 37 - -
Trre4g04150 83 PANTHER PHOSPHOLIPASE D 2 56 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04150 Trre-Chr4 50230726 50231445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04150 1 55 Phospholipase D Gene Family (Wang group) AT4G11830 87.273 7.40e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04150 K01115 - gmx:100786241 108.612