Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04134 ATGCTTCCATCTTCAACAAATCCACCTAGCTTTTATGGATGCCAAGAAAGACAAAAAAGGAGTAAACCCATTGAACAAGTTAGTAGATGTACATTGTTCAGAAGACACTTCTGCAAGGTATTTTTTTCGAAAACTATGAAAAATGGGGTGGCAAAGATGCGATTAGAGGTGCTTGTGACTTTGATGGTCATGGGACACACTTTAGCTAGAGTTGCAGCCTACAAGGTGTTCGGTTACGAGCCAGACATATTATCTGCGGTTGATCATGCCATCACTGATGGGATTGATGTTATATCGATCTCCATGAATTCTAAATTCCCCCGTGAATTTATTGGCTCCAGTTTTGCCATAGGGACATTCAATGCCATAGTTAATGGCATAATTTATCTATTTCCTAATCCAACTTACGGTGCATAA 417 0.3957 MLPSSTNPPSFYGCQERQKRSKPIEQVSRCTLFRRHFCKVFFSKTMKNGVAKMRLEVLVTLMVMGHTLARVAAYKVFGYEPDILSAVDHAITDGIDVISISMNSKFPREFIGSSFAIGTFNAIVNGIIYLFPNPTYGA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04134 138 Gene3D Peptidase S8/S53 domain 68 128 IPR036852 GO:0004252|GO:0006508
Trre4g04134 138 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 65 129 IPR045051 -
Trre4g04134 138 SUPERFAMILY Subtilisin-like 69 131 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04134 Trre-Chr4 50012351 50012767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04134 69 128 Subtilisin-like Serine Gene Family AT5G58820 49.231 2.49e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04134 - - ccaj:109807325 63.5438