Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04132 ATGGAGAACATGTTTTTGGGTTGCTTGTATCTTTGCTTCATTCAACATACCTTCATTGAGTTGGGCATAATTGCTCTTCATATCAAGCTTCGTGCAATTGGAGGAAACAAGACCAAGACACTAGGCCCTGGTGCTCAAGCTGCTCTCCGTTCTTCGGCACGTTCTGGAATGAAAATTGGCCGCATAGGTGATCATAACATCCTATGA 207 0.4396 MENMFLGCLYLCFIQHTFIELGIIALHIKLRAIGGNKTKTLGPGAQAALRSSARSGMKIGRIGDHNIL 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04132 68 Gene3D Ribosomal protein S11 4 67 IPR036967 GO:0003735|GO:0005840|GO:0006412
Trre4g04132 68 Pfam Ribosomal protein S11 16 64 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04132 Trre-Chr4 49983177 49983814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04132 20 64 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 80.000 5.12e-20 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04132 K02955 - bbuf:121008162 78.9517