Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g04099 ATGTCAGCTGTGATTGGATCATTTGGTTACATGGCTCCAGAATATGTTCAAACAACTAAAGTGAATGAAAAAATTGATGTCTTCAGCTTTGGTGTTATCCTATTGGAACTAACAACTGGTAAAGAAGCTACTTATGGTGATGAACATTCATCACTTGTAGAATGGTCATGGAGGCATGTTCATGAAGGAAGCAATATAGAAGAGCTTCTTGACAAAGATTTTGTGGAACAAAGTTATTTGCATGAAATGTGTTGCATTTTCAAACTTGGAATAATGTGTACTGCTACACTTCCTTCTAGTAGACCTTCCATGAAAGAGGTGTTAAATATATTGCTTAGATTTGAAGGAGGGATTGTGTTTGGAGAGAGCAATGTTAATGTTGGGGAATATGATGTTGCTCCTTTTCTTAAAAATTCAAAAAGAGATAGTAGGTTAGATTTTGTTGATAGTGATAGTGATAGTGATTAA 468 0.3462 MSAVIGSFGYMAPEYVQTTKVNEKIDVFSFGVILLELTTGKEATYGDEHSSLVEWSWRHVHEGSNIEELLDKDFVEQSYLHEMCCIFKLGIMCTATLPSSRPSMKEVLNILLRFEGGIVFGESNVNVGEYDVAPFLKNSKRDSRLDFVDSDSDSD 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g04099 155 SUPERFAMILY Protein kinase-like (PK-like) 2 109 IPR011009 -
Trre4g04099 155 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 3 115 - -
Trre4g04099 155 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
Trre4g04099 155 Pfam Protein kinase domain 2 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g04099 155 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g04099 Trre-Chr4 49637640 49638616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g04099 1 111 Receptor kinase-like Gene Family AT5G25930 61.261 8.04e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre4g04099 Pkinase 3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g04099 - - cam:101515509 268.085