Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03958 ATGTATAAACCATTTGTGACATGTGATGATCCTAAAGGAGTTGTTGAGTGTGGAAGTATAAGAAGGTATAATAAGTCAAATTCTCACAAAATGAAGGACAAGACAAAGAGTCGAAAGACGGCCGAAAATTTAGAGACAAACAAACAAGACAAAGAAGAGAAAATGTCATCAAAAGGTTCGAACGAAAGAGGTTTTGATCCATCTTCTTTGCAGCTTGTGAAGGTGTCTAGAGGCGCCGAGAAGTTGAATAACATGATTGAGTCGTGGTCTAGAGGTTTGAGGTACGATGGAAGATCCGATGATATTGCAAAGGATTTGTTAAAAGGTGCTCTTGATTTGCAAGAATCTCTTGAGATGCTTCAAAAGGTGCAAGAAGTTTCGAATAATATGGCTCGATCGAAGAGGAAACAAGACGAGGAACGTGAAAGAAGTAGAATTGATGCAAAGGTGAATGATGGAGTTAGATCAACACATTCCAATCGTTTTGTCGAACACAATTCCGCTTATGGTTCTTCGAGTAGTTGTAGAGAGGAACTTAAGAATGTGATTAAGGAGAGTTTGGTTAGACAGAATCTATTCCAAAGCACAAGCACTTCTGAAGGATTGGATTCAGTTTCAGCAGCATTCCCTTCTACAAGCTCAAGTCAATCTTCTGTTGTTTGGTATGACAAACTTTCCGATTCTTCATCGTCACCGAATTTTCCAAGGAAGGAAAAAAGTACCAATCTTGTTGCAAAGTTGATGGGATTAGAACAAGTCCCTTCAAGATCAACATTTCCATCTGTTATGCAAAAACAGTTGGAGAATCAAAAGATTGTGAATCAAAAGAGACCTGTATTCGAGATTGACACGCCGAAGGCAAGAAAGAATAGTTTATTTGTCGAGAGGGCTAATATGGAGAAACAAAAGACTCTGAGGGAAATTCTTGAAACGACTCATTACAATGGAATGTTGAAGAATAGTCCTATTAGAGAGCACAAGCTTCATAATCATGTTCATCATTCGCATGATCTTGATTACCAAAAGTTTGATGATTTACCGCCGATTGTGCTCATGAAACCTCGGCGCGCTACATATCAAGAATTTGTAGAAACTTATGAGCCAGTTCGTCAGGAAGATTTCTCGTTTAGAAATCTAAAAGAGAAAACAGTCTCTTCAAAAACCTTCAAGCCTAGGGAAGGTTCGGCTACAAATATGAGAAAAGACGTGGAAGAAAATCTATCCAAAAGGATTTTCAAAGAAGAAAGACCGAAGCGTGTCAAAGAGGTTGTGGAATTTGATGTGAAAGAAATCAAACCGGTCGAAAACAAGAAGGTTCAAAAAACTAGTCACAGGTTACAGGCAAGTGAAAAAGTCGATGAAAAAGTTAAGGTGAAGACTATTAATATCAGCAGAAAGCCGCTAGAGAAGGATGTTTCAAAAGCTAAATTTGTAACGAAAGCTCAAGATCAAGGAGAAATCAGGTCTAGTAGTGAAAAGTTAAGGAAGCCGAGAAGTGTGTCGAGGATTGAGAAGAATGAGATTCCATACAAAAAAGGAACTGCTTCAAATTCAAATATCATCACAAAACCAAAGACACAAAAAGTTAATAATTCAAAGGAATTGAGAAAAAGTCCAATGAAGAAACTAAGGTCTGTCGATGAGGCTGAAGCAGCTATACCACTTGATGAACAATTAAGAGAAGAAGAGGTAATGAGTATGAATGTTTCTTGTAAAGATGAGTGTACCGAGATTAAAATAATCACTACAATAACTGAAGATCTCATCATGGAGCATGAAGCAGTAGACACCGATGTAAATAAGACTAAAGATAATTATGAGGCGGATCGTCATAATTCTTCAAGTGATGATGTTTTGATGATAAATTGTGAACATGAAAATGATACCATCTCAGCCGAGGAAGCTCTTGACACCACCAGCATCAGTGAAACTTGTTTCGAGCAAGTCAAAGACATTGCTGATACCACGAGTATCAGTGAAACCGATTTCCAGCCTGATAAAGTCGACACTTCTGAGCTGAAATATTTGCTTCTAACAAGTAAATCATTTATTGACCATGCAGATGAGCATCTCAATCTTGATGTTGATTATCCTAAGATCATACCAAAGATTGAAACTAATGGAATAGCCAATACAAAACTCTATTTGGATTGTGCAAACGAACTCGCCGAGCGAAAAAGTCTTCAAGAGTCATCACAAGTAGTTCACCCTTTATTGCTAACTTGTGTAGGGAATTCAAGATTGCAAATCTCTTTGAGCAGCTTGGTTGAAGAAGTGAACATTGCAATTGAGAATTTGACATCTTATAGTGAAAATTCTGAGACTAAACTTATTTTGGATAATGTTTGTGCAATGTTGGAGAGAGATATGAATTGCAACAATAGATTGATGAATGGAATATGGAACTGTGGTTGGAGGCATGGATTTTCTTGTGATGAAGTTGAGAAAGTTGTTCATGAAGTAGAAAACATGGTTTTAGGTGGATTAATTGAGGAGATTATTGTAAATTTATGA 2514 0.3723 MYKPFVTCDDPKGVVECGSIRRYNKSNSHKMKDKTKSRKTAENLETNKQDKEEKMSSKGSNERGFDPSSLQLVKVSRGAEKLNNMIESWSRGLRYDGRSDDIAKDLLKGALDLQESLEMLQKVQEVSNNMARSKRKQDEERERSRIDAKVNDGVRSTHSNRFVEHNSAYGSSSSCREELKNVIKESLVRQNLFQSTSTSEGLDSVSAAFPSTSSSQSSVVWYDKLSDSSSSPNFPRKEKSTNLVAKLMGLEQVPSRSTFPSVMQKQLENQKIVNQKRPVFEIDTPKARKNSLFVERANMEKQKTLREILETTHYNGMLKNSPIREHKLHNHVHHSHDLDYQKFDDLPPIVLMKPRRATYQEFVETYEPVRQEDFSFRNLKEKTVSSKTFKPREGSATNMRKDVEENLSKRIFKEERPKRVKEVVEFDVKEIKPVENKKVQKTSHRLQASEKVDEKVKVKTINISRKPLEKDVSKAKFVTKAQDQGEIRSSSEKLRKPRSVSRIEKNEIPYKKGTASNSNIITKPKTQKVNNSKELRKSPMKKLRSVDEAEAAIPLDEQLREEEVMSMNVSCKDECTEIKIITTITEDLIMEHEAVDTDVNKTKDNYEADRHNSSSDDVLMINCEHENDTISAEEALDTTSISETCFEQVKDIADTTSISETDFQPDKVDTSELKYLLLTSKSFIDHADEHLNLDVDYPKIIPKIETNGIANTKLYLDCANELAERKSLQESSQVVHPLLLTCVGNSRLQISLSSLVEEVNIAIENLTSYSENSETKLILDNVCAMLERDMNCNNRLMNGIWNCGWRHGFSCDEVEKVVHEVENMVLGGLIEEIIVNL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03958 837 MobiDBLite consensus disorder prediction 22 72 - -
Trre4g03958 837 Coils Coil 123 143 - -
Trre4g03958 837 Coils Coil 34 61 - -
Trre4g03958 837 MobiDBLite consensus disorder prediction 35 60 - -
Trre4g03958 837 MobiDBLite consensus disorder prediction 129 148 - -
Trre4g03958 837 PANTHER OS01G0228800 PROTEIN-RELATED 2 836 - -
Trre4g03958 837 MobiDBLite consensus disorder prediction 127 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03958 Trre-Chr4 47809894 47812892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03958 626 834 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 27.434 6.95e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03958 - - gmx:102663636 894.419