Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03916 ATGATCTTTAATTGGAGGTGTAGTAACCTTACAAAGAAAAGGAAGCTTAAGAGCATAATTAACATTAATCTTAACCCAATAATAGAATCAGAACTTGGTGTTGATTCAAAATCCCTTAATCTCAAATGGAATTGGATCTCAAGGACATTGAACAAAGGTACCGCAGAATGTAAACATGGAGAAACTGCAACATGGCTATTTCTTGAGGGACAATCCCTTACTCTATTATTAATTGGGCCTCTCTTACAGACCTGTAGGAATCTCAATCACAATCAGCTCCAGCAAGCACTGAATGTCAACTTCAAAAACTTTCTACCCTCTCCTAATTGTGAGAGATATGTTTTTCAACTCTTTGACAGGTATCTGCAAAACAACAAGTGTATAAAGTTAAATCAGCTAACAATAAATTCTGGAGGGGTTGCTTCCTTTGCCCTTTTCAATGTCCATGGGAGTGATGATGCATCTGTAAAAGAAGCAGTAGCTGTCATAAAGTTATCTTCATCGAGAATGGCAACACAGTCCGAATGTCTCGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACGCCACAGGCTAGAGTCATTCACAATACCAATTCAGAATGGCTCCAAATAAAAGAAGCTGCAGAAAAAGCAAGGGATGCAGCAAGTTTTGAGCGTGATGCAATTGGTGAAACAACATGTTCAGAGCTTTTGAAAGCACTTGAGCTTAGTCGGTGTCTCTTGTTTATGAGAATGGATGAGATGATGCGTGGTCAAAGAGGATGGAGGGAGTTATCAATCTTGGGAGATAAAATGAACATGTTTAGTGGGATGATAGAAGGGTTGATTTGGTCTCCACAAAGCAACAACGAATTTGATAAGCAAGTTCCACTGATGGATGAGATTGATACAAAGAAATAG 903 0.3898 MIFNWRCSNLTKKRKLKSIININLNPIIESELGVDSKSLNLKWNWISRTLNKGTAECKHGETATWLFLEGQSLTLLLIGPLLQTCRNLNHNQLQQALNVNFKNFLPSPNCERYVFQLFDRYLQNNKCIKLNQLTINSGGVASFALFNVHGSDDASVKEAVAVIKLSSSRMATQSECLGYEFAKWLGVQTPQARVIHNTNSEWLQIKEAAEKARDAASFERDAIGETTCSELLKALELSRCLLFMRMDEMMRGQRGWRELSILGDKMNMFSGMIEGLIWSPQSNNEFDKQVPLMDEIDTKK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03916 300 Pfam Actin-fragmin kinase, catalytic 130 264 IPR015275 -
Trre4g03916 300 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 130 245 IPR035010 GO:0004721|GO:0009737|GO:0043622
Trre4g03916 300 SUPERFAMILY Protein kinase-like (PK-like) 132 246 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03916 Trre-Chr4 47336323 47339749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03916 132 244 Protein tyrosine phosphatase (PTP) family AT5G23720 69.912 1.15e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03916 K14165 - jre:109000311 178.718